RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SLC36A1Q7Z2H8 476 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 ALPK2Q86TB3 2170 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 RTN4RL1Q86UN2 441 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-201ENST00000352993 SLC35F2Q8IXU6 374 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 OR9A2Q8NGT5 310 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 ELP5Q8TE02 316 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 TMED6Q8WW62 240 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 BRI3BPQ8WY22 251 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 BPIFA2Q96DR5 249 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 NKX3-1Q99801 234 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-201ENST00000352993 RSRP1Q9BUV0 290 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 SGPP1Q9BX95 441 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 CMC2Q9NRP2 79 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 C2orf42Q9NWW7 574 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 CALML5Q9NZT1 146 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 UPB1Q9UBR1 384 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 SHPKQ9UHJ6 478 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF337Q9Y3M9 751 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 TMEM82A0PJX8 343 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 MAN2B1O00754 1011 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 ERI3O43414 337 aaKnown RBP7.02□□□□□ -1.29
BRCA1-201ENST00000352993 PCDH8O95206 1070 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 AMY2AP04746 511 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 CSF1P09603 554 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 OR4E1P0C645 316 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 AKR1A1P14550 325 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 CSNK2A2P19784 350 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-201ENST00000352993 VAMP1P23763 118 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 DPP4P27487 766 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 TM4SF4P48230 202 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 PRLHRP49683 370 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 SKP1P63208 163 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 SLC9A5Q14940 896 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 AMZ1Q400G9 498 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 DHRS7BQ6IAN0 325 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-201ENST00000352993 MRM1Q6IN84 353 aaKnown RBP7.02□□□□□ -1.29
BRCA1-201ENST00000352993 RPL22L1Q6P5R6 122 aaKnown RBP7.02□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF627Q7L945 461 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 TRAM1L1Q8N609 369 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 TEX19Q8NA77 164 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 OR56A1Q8NGH5 318 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 KISS1RQ969F8 398 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-201ENST00000352993 HAVCR1Q96D42 359 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 CNN2Q99439 309 aaKnown RBP7.02□□□□□ -1.29
BRCA1-201ENST00000352993 GAS2L1Q99501 681 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-201ENST00000352993 RPS10P5Q9NQ39 176 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 PCOLCE2Q9UKZ9 415 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 MED31Q9Y3C7 131 aa7.02□□□□□ -1.29
BRCA1-201ENST00000352993 TRAV14DV4A0A0A6YYC5 116 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 OR2T1O43869 369 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 ACTL6AO96019 429 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 THY1P04216 161 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 NQO2P16083 231 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 AK4P27144 223 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-201ENST00000352993 SDHAP31040 664 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 ACTA2P62736 377 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 ACTG2P63267 376 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 PON3Q15166 354 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 NKPD1Q17RQ9 610 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 FAM76BQ5HYJ3 339 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 OR4C11Q6IEV9 310 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 JMJD6Q6NYC1 403 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-201ENST00000352993 FIGNL1Q6PIW4 674 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 ENPP7Q6UWV6 458 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 TMEM200AQ86VY9 491 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 OR4E2Q8NGC2 313 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 C15orf40Q8WUR7 153 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 PPP1R1CQ8WVI7 109 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 NXPE3Q969Y0 559 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 INTS12Q96CB8 462 aaKnown RBP7.01□□□□□ -1.29
BRCA1-201ENST00000352993 ARHGDIGQ99819 225 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 MICU1Q9BPX6 476 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 XKR8Q9H6D3 395 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 IKZF2Q9UKS7 526 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 MYOFQ9NZM1 2061 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 MEX3AA1L020 520 aaKnown RBP7.01□□□□□ -1.29
BRCA1-201ENST00000352993 GGT3PA6NGU5 568 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 WRBO00258 174 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 BHLHE40O14503 412 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 LEFTY1O75610 366 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 OR2F2O95006 317 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 PAPLNO95428 1278 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 RAB3DO95716 219 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 HLA-AP01891 365 aaKnown RBP7.01□□□□□ -1.29
BRCA1-201ENST00000352993 H2AFB1P0C5Y9 115 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 HMGA1P17096 107 aaKnown RBP7.01□□□□□ -1.29
BRCA1-201ENST00000352993 PRSS3P35030 304 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 GPR1P46091 355 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 ATP1B3P54709 279 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 DEFA6Q01524 100 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 OR2F1Q13607 317 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 KCNAB1Q14722 419 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 MICBQ29980 383 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF805Q5CZA5 627 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 STPG1Q5TH74 334 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 STEAP1BQ6NZ63 245 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 LNX2Q8N448 690 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 KCNRGQ8N5I3 272 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 OR51D1Q8NGF3 324 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 TCTEX1D2Q8WW35 142 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms