RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 COPS3Q9UNS2 423 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 CAMK2AQ9UQM7 478 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 TEX13CA0A0J9YWL9 993 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 OR6C70A6NIJ9 312 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 TTLL8A6PVC2 850 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 FAM25AB3EWG3 89 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 FAM25CB3EWG5 89 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 FAM25GB3EWG6 89 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 ETV2O00321 342 aaPredicted RBP9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 ORC5O43913 435 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 FADS1O60427 444 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 ITGA10O75578 1167 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 RAF1P04049 648 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 AHCYP23526 432 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 MAPK3P27361 379 aaPredicted RBP9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 HOXA6P31267 233 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 RAB25P57735 213 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 ERVK-25P63136 954 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 ZNF117Q03924 483 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 TP53I3Q53FA7 332 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 PLA1AQ53H76 456 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 SNAP47Q5SQN1 464 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 GPR135Q8IZ08 494 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 ZNF321PQ8N8H1 164 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 ZNRF4Q8WWF5 429 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 DEDD2Q8WXF8 326 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 LMF1Q96S06 567 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 MMP28Q9H239 520 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 PLEKHA1Q9HB21 404 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 PNO1Q9NRX1 252 aaKnown RBP9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 UCKL1Q9NWZ5 548 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 COPS7AQ9UBW8 275 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 POU2F3Q9UKI9 436 aa9.75□□□□□ -0.85
TRAF3IP2-201ENST00000340026 CPAMD8Q8IZJ3 1885 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 CCDC163A0A0D9SF12 145 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 A0A0G2JMP0 313 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 TRBV2A0A0J9YWF9 115 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 TRBV5-5A0A0J9YX44 114 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 A0A0X1KG70 313 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 ADAM10O14672 748 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 AQP2P41181 271 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 EFNA3P52797 238 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 SUMO3P55854 103 aaPredicted RBP9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 NNATQ16517 81 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 SGCBQ16585 318 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 RHBDD2Q6NTF9 364 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 LEG1Q6P5S2 330 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 RABEPKQ7Z6M1 372 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 OR4M2Q8NGB6 313 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 TSLPQ969D9 159 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 RASD2Q96D21 266 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 RNF170Q96K19 258 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 Q96M85 177 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 MOGAT1Q96PD6 335 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 THAP7Q9BT49 309 aaPredicted RBP9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 EXPH5Q8NEV8 1989 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 SMIM30A4D0T7 59 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 LRRN3E7EW58 273 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 AIPO00170 330 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 SULT1B1O43704 296 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 ICOSLGO75144 302 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 UPK3AO75631 287 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 NAGAP17050 411 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 TACR3P29371 465 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 CSF2RBP32927 897 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 ACVR1BP36896 505 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 P2RX1P51575 399 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 MAP2K6P52564 334 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 OR1D5P58170 312 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 CTXN1P60606 82 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 RPL18Q07020 188 aaKnown RBP9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 DYRK1AQ13627 763 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 CBFBQ13951 182 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 ZFP69Q49AA0 526 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 UBE2NLQ5JXB2 153 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 RPTNQ6XPR3 784 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 SLC29A4Q7RTT9 530 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 SAMD12Q8N8I0 201 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 LSM14AQ8ND56 463 aaKnown RBP9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 MAP6Q96JE9 813 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 LRRN3Q9H3W5 708 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 NIPAL2Q9H841 368 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 ACOXLQ9NUZ1 547 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 VSX1Q9NZR4 365 aaPredicted RBP9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 PCDHGA9Q9Y5G4 932 aaKnown RBP9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 FKBP7Q9Y680 259 aa9.74□□□□□ -0.85
TRAF3IP2-201ENST00000340026 FAM240BA0A1B0GVZ2 78 aa9.73□□□□□ -0.85
TRAF3IP2-201ENST00000340026 C7orf66A4D0T2 115 aa9.73□□□□□ -0.85
TRAF3IP2-201ENST00000340026 OR2W5A6NFC9 320 aa9.73□□□□□ -0.85
TRAF3IP2-201ENST00000340026 CENPXA8MT69 81 aa9.73□□□□□ -0.85
TRAF3IP2-201ENST00000340026 BCAT2O15382 392 aaPredicted RBP9.73□□□□□ -0.85
TRAF3IP2-201ENST00000340026 SELENOFO60613 162 aa9.73□□□□□ -0.85
TRAF3IP2-201ENST00000340026 DXOO77932 396 aaKnown RBP9.73□□□□□ -0.85
TRAF3IP2-201ENST00000340026 CALCBP10092 127 aa9.73□□□□□ -0.85
TRAF3IP2-201ENST00000340026 ATF1P18846 271 aa9.73□□□□□ -0.85
TRAF3IP2-201ENST00000340026 IL12BP29460 328 aa9.73□□□□□ -0.85
TRAF3IP2-201ENST00000340026 ARL4DP49703 201 aa9.73□□□□□ -0.85
TRAF3IP2-201ENST00000340026 OR10A3P58181 314 aa9.73□□□□□ -0.85
TRAF3IP2-201ENST00000340026 MRPS10P82664 201 aaKnown RBP9.73□□□□□ -0.85
TRAF3IP2-201ENST00000340026 IFITM2Q01629 132 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms