RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 RNF13O43567 381 aa10.94□□□□□ -0.66
LIMK2-202ENST00000333611 INHAP05111 366 aa10.94□□□□□ -0.66
LIMK2-202ENST00000333611 GYPBP06028 91 aa10.94□□□□□ -0.66
LIMK2-202ENST00000333611 RHOP08100 348 aa10.94□□□□□ -0.66
LIMK2-202ENST00000333611 CHRM4P08173 479 aa10.94□□□□□ -0.66
LIMK2-202ENST00000333611 QDPRP09417 244 aa10.94□□□□□ -0.66
LIMK2-202ENST00000333611 HPGDP15428 266 aa10.94□□□□□ -0.66
LIMK2-202ENST00000333611 WASP42768 502 aa10.94□□□□□ -0.66
LIMK2-202ENST00000333611 F2RL1P55085 397 aa10.94□□□□□ -0.66
LIMK2-202ENST00000333611 SP3Q02447 781 aa10.94□□□□□ -0.66
LIMK2-202ENST00000333611 FNDC3BQ53EP0 1204 aaKnown RBP10.94□□□□□ -0.66
LIMK2-202ENST00000333611 ZNF805Q5CZA5 627 aa10.94□□□□□ -0.66
LIMK2-202ENST00000333611 UNQ6494/PRO21346Q6UXR6 183 aa10.94□□□□□ -0.66
LIMK2-202ENST00000333611 FCRLAQ7L513 359 aa10.94□□□□□ -0.66
LIMK2-202ENST00000333611 FAM26EQ8N5C1 309 aa10.94□□□□□ -0.66
LIMK2-202ENST00000333611 CYB561A3Q8NBI2 242 aa10.94□□□□□ -0.66
LIMK2-202ENST00000333611 SMPDL3BQ92485 455 aa10.94□□□□□ -0.66
LIMK2-202ENST00000333611 NUS1Q96E22 293 aa10.94□□□□□ -0.66
LIMK2-202ENST00000333611 CPEB1Q9BZB8 566 aaKnown RBP10.94□□□□□ -0.66
LIMK2-202ENST00000333611 SLC25A32Q9H2D1 315 aa10.94□□□□□ -0.66
LIMK2-202ENST00000333611 KCND3Q9UK17 655 aa10.94□□□□□ -0.66
LIMK2-202ENST00000333611 FARSAQ9Y285 508 aaKnown RBP10.94□□□□□ -0.66
LIMK2-202ENST00000333611 PCYT1BQ9Y5K3 369 aaPredicted RBP10.94□□□□□ -0.66
LIMK2-202ENST00000333611 DSPPQ9NZW4 1301 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 C5orf51A6NDU8 294 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 UBL3O95164 117 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 IFNGR1P15260 489 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 RAB6AP20340 208 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 VAMP1P23763 118 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 MAGEB1P43366 347 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 ID2Q02363 134 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 UBXN2BQ14CS0 331 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 SURF2Q15527 256 aaPredicted RBP10.93□□□□□ -0.66
LIMK2-202ENST00000333611 PCGF3Q3KNV8 242 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 ACSM3Q53FZ2 586 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 PIGXQ8TBF5 258 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 JSRP1Q96MG2 331 aaPredicted RBP10.93□□□□□ -0.66
LIMK2-202ENST00000333611 NKX3-1Q99801 234 aaPredicted RBP10.93□□□□□ -0.66
LIMK2-202ENST00000333611 C8orf33Q9H7E9 229 aaPredicted RBP10.93□□□□□ -0.66
LIMK2-202ENST00000333611 FN3KRPQ9HA64 309 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 HMX1Q9NP08 348 aaPredicted RBP10.93□□□□□ -0.66
LIMK2-202ENST00000333611 SMCO4Q9NRQ5 59 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 OPN4Q9UHM6 478 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 HELZP42694 1942 aaKnown RBP10.93□□□□□ -0.66
LIMK2-202ENST00000333611 CACNA1IQ9P0X4 2223 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 ANTXRLA6NF34 631 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 E9PQ18 207 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 GP1BAP07359 652 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 ACP5P13686 325 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 TMEM201Q5SNT2 666 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 ADIPOR2Q86V24 386 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 FAM129CQ86XR2 697 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 OR4N5Q8IXE1 308 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 OR51Q1Q8NH59 317 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 RAB7BQ96AH8 199 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 MISP3Q96FF7 219 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 TMEM41AQ96HV5 264 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 C14orf144Q96I85 54 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 ARHGAP9Q9BRR9 750 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 ALG8Q9BVK2 526 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 SMOC1Q9H4F8 434 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 GAREM1Q9H706 876 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 KCNK7Q9Y2U2 307 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 MMP24Q9Y5R2 645 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 ZNF432O94892 652 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 SFTPCP11686 197 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 GTF2F2P13984 249 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 ZNF25P17030 456 aaPredicted RBP10.93□□□□□ -0.66
LIMK2-202ENST00000333611 SOX2P48431 317 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 RPS27AP62979 156 aaKnown RBP10.93□□□□□ -0.66
LIMK2-202ENST00000333611 UBA52P62987 128 aaKnown RBP10.93□□□□□ -0.66
LIMK2-202ENST00000333611 E2F1Q01094 437 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 RAB40BQ12829 278 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 FAM46CQ5VWP2 391 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 ARHGAP11AQ6P4F7 1023 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 SEMA4GQ9NTN9 838 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 WBP1LQ9NX94 342 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 GTF2A1LQ9UNN4 478 aa10.93□□□□□ -0.66
LIMK2-202ENST00000333611 USP34Q70CQ2 3546 aa10.92□□□□□ -0.66
LIMK2-202ENST00000333611 PRAF2O60831 178 aa10.92□□□□□ -0.66
LIMK2-202ENST00000333611 SNRPCP09234 159 aaKnown RBP10.92□□□□□ -0.66
LIMK2-202ENST00000333611 ADCYAP1P18509 176 aa10.92□□□□□ -0.66
LIMK2-202ENST00000333611 ATF1P18846 271 aa10.92□□□□□ -0.66
LIMK2-202ENST00000333611 MC3RP41968 323 aa10.92□□□□□ -0.66
LIMK2-202ENST00000333611 C21orf58P58505 322 aa10.92□□□□□ -0.66
LIMK2-202ENST00000333611 AKR1E2Q96JD6 320 aa10.92□□□□□ -0.66
LIMK2-202ENST00000333611 AMDHD1Q96NU7 426 aa10.92□□□□□ -0.66
LIMK2-202ENST00000333611 A4GALTQ9NPC4 353 aa10.92□□□□□ -0.66
LIMK2-202ENST00000333611 EXOSC3Q9NQT5 275 aaKnown RBP10.92□□□□□ -0.66
LIMK2-202ENST00000333611 SIRT3Q9NTG7 399 aaPredicted RBP10.92□□□□□ -0.66
LIMK2-202ENST00000333611 MOKQ9UQ07 419 aa10.92□□□□□ -0.66
LIMK2-202ENST00000333611 NPIPA5A0A0B4J1W7 369 aa10.92□□□□□ -0.66
LIMK2-202ENST00000333611 SERTM1A2A2V5 107 aa10.92□□□□□ -0.66
LIMK2-202ENST00000333611 A8MVJ9 347 aa10.92□□□□□ -0.66
LIMK2-202ENST00000333611 NPIPA7E9PJI5 369 aa10.92□□□□□ -0.66
LIMK2-202ENST00000333611 KIAA0355O15063 1070 aa10.92□□□□□ -0.66
LIMK2-202ENST00000333611 ACTL6AO96019 429 aa10.92□□□□□ -0.66
LIMK2-202ENST00000333611 NPIPA8P0DM63 369 aa10.92□□□□□ -0.66
LIMK2-202ENST00000333611 CERS1P27544 350 aa10.92□□□□□ -0.66
LIMK2-202ENST00000333611 CST5P28325 142 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms