RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 ELOA3Q8NG57 546 aa11.86□□□□□ -0.51
GTF3C6-201ENST00000329970 NFKBIDQ8NI38 313 aa11.86□□□□□ -0.51
GTF3C6-201ENST00000329970 KTI12Q96EK9 354 aaPredicted RBP11.86□□□□□ -0.51
GTF3C6-201ENST00000329970 OXGR1Q96P68 337 aa11.86□□□□□ -0.51
GTF3C6-201ENST00000329970 RHNO1Q9BSD3 238 aa11.86□□□□□ -0.51
GTF3C6-201ENST00000329970 KATNB1Q9BVA0 655 aa11.86□□□□□ -0.51
GTF3C6-201ENST00000329970 RABEP2Q9H5N1 569 aa11.86□□□□□ -0.51
GTF3C6-201ENST00000329970 B3GAT1Q9P2W7 334 aa11.86□□□□□ -0.51
GTF3C6-201ENST00000329970 RTTNQ86VV8 2226 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 TRAV36DV7A0A075B6V5 113 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 A0A1B0GWA3 101 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 EVPLLA8MZ36 301 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 NR5A2O00482 541 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 AIM2O14862 343 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 KRT33AO76009 404 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 PDE5AO76074 875 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 IGLV1-44P01699 117 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 CSF3P09919 207 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 ZNF43P17038 809 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 SLC6A2P23975 617 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 HTR2AP28223 471 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 RPS5P46782 204 aaKnown RBP11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 NUDT6P53370 316 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 CHRNB3Q05901 458 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 RAB35Q15286 201 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 ALG10BQ5I7T1 473 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 SWT1Q5T5J6 900 aaKnown RBP11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 ANKRD16Q6P6B7 361 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 ULK3Q6PHR2 472 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 DLEU7Q6UYE1 221 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 LSRQ86X29 649 aaPredicted RBP11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 C10orf111Q8N326 155 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 TSPEARQ8WU66 669 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 BCL2L2Q92843 193 aaPredicted RBP11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 SLC41A3Q96GZ6 507 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 ALKBH3Q96Q83 286 aaPredicted RBP11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 SLC38A2Q96QD8 506 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 ZNF607Q96SK3 696 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 C1QTNF6Q9BXI9 259 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 NELFAQ9H3P2 528 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 ATP23Q9Y6H3 246 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 ATRQ13535 2644 aa11.85□□□□□ -0.51
GTF3C6-201ENST00000329970 IGKV1D-42A0A075B6H8 117 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 A0A087WUJ7 227 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 A0A0B4J2E0 115 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 IGHV1-18A0A0C4DH31 117 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 A0A1B0GX12 115 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 HMGB1P1B2RPK0 211 aaPredicted RBP11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 AKAP8O43823 692 aaKnown RBP11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 SSX4O60224 188 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 UPK3AO75631 287 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 SERPINB7O75635 380 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 LGI1O95970 557 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 IGKV3-15P01624 115 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 TP53P04637 393 aaPredicted RBP11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 SLC25A16P16260 332 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 PCBP3P57721 371 aaKnown RBP11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 HOXC5Q00444 222 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 LOXL1Q08397 574 aaPredicted RBP11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 RBBP4Q09028 425 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 SCARB2Q14108 478 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 ADRM1Q16186 407 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 SWI5Q1ZZU3 235 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 HIKESHIQ53FT3 197 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 AGKQ53H12 422 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 RUNDC3AQ59EK9 446 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 CLEC2AQ6UVW9 174 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 H1FNTQ75WM6 255 aaPredicted RBP11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 LINGO2Q7L985 606 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 COMTD1Q86VU5 262 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 DPP10Q8N608 796 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 SCAIQ8N9R8 606 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 HIPK4Q8NE63 616 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 TAAR8Q969N4 342 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 SLC25A36Q96CQ1 311 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 SLC47A1Q96FL8 570 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 EPYCQ99645 322 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 CPPED1Q9BRF8 314 aaPredicted RBP11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 SIKE1Q9BRV8 207 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 IKZF5Q9H5V7 419 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 ZNF385DQ9H6B1 395 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 VIPAS39Q9H9C1 493 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 KLHL14Q9P2G3 628 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 LEF1Q9UJU2 399 aaPredicted RBP11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 CORINQ9Y5Q5 1042 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 PMF1-BGLAPU3KQ54 211 aa11.84□□□□□ -0.51
GTF3C6-201ENST00000329970 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.84□□□□□ -0.512e-7■■■■□ 21
GTF3C6-201ENST00000329970 IGHV4-30-2A0A087WSY4 118 aa11.83□□□□□ -0.52
GTF3C6-201ENST00000329970 ATP6V1G2-DDX39BF2Z307 99 aa11.83□□□□□ -0.52
GTF3C6-201ENST00000329970 M0R082 166 aa11.83□□□□□ -0.52
GTF3C6-201ENST00000329970 TPST1O60507 370 aa11.83□□□□□ -0.52
GTF3C6-201ENST00000329970 FMO6PO60774 539 aa11.83□□□□□ -0.52
GTF3C6-201ENST00000329970 SLC43A1O75387 559 aa11.83□□□□□ -0.52
GTF3C6-201ENST00000329970 C8BP07358 591 aa11.83□□□□□ -0.52
GTF3C6-201ENST00000329970 PTNP21246 168 aa11.83□□□□□ -0.52
GTF3C6-201ENST00000329970 EFNA4P52798 201 aa11.83□□□□□ -0.52
GTF3C6-201ENST00000329970 CLDN17P56750 224 aa11.83□□□□□ -0.52
GTF3C6-201ENST00000329970 UBE2NP61088 152 aaKnown RBP11.83□□□□□ -0.52
GTF3C6-201ENST00000329970 NCALDP61601 193 aa11.83□□□□□ -0.52
GTF3C6-201ENST00000329970 ROR2Q01974 943 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms