RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 FAM221AA4D161 298 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 KRT33AO76009 404 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 OR6A2O95222 327 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 LYPD3O95274 346 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 HRGP04196 525 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 THY1P04216 161 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 UMPSP11172 480 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 TCN1P20061 433 aaPredicted RBP13.1□□□□□ -0.31
CLRN1-203ENST00000328863 CBLP22681 906 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 IGHV1-2P23083 117 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 EDNRAP25101 427 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 HOXC12P31275 282 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 NR1H2P55055 460 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 PUDPQ08623 228 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 FAPQ12884 760 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 PMS2P3Q13401 168 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 PIN1Q13526 163 aaPredicted RBP13.1□□□□□ -0.31
CLRN1-203ENST00000328863 STK11Q15831 433 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 ZNF74Q16587 644 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 BEX5Q5H9J7 111 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 GLYATQ6IB77 296 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 NIPAL3Q6P499 406 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 CREB3L2Q70SY1 520 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 CDH24Q86UP0 819 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 TSPYL5Q86VY4 417 aaPredicted RBP13.1□□□□□ -0.31
CLRN1-203ENST00000328863 CYP4Z1Q86W10 505 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 WFDC8Q8IUA0 241 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 C1orf162Q8NEQ5 155 aaPredicted RBP13.1□□□□□ -0.31
CLRN1-203ENST00000328863 OR5J2Q8NH18 312 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 MOGAT1Q96PD6 335 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 ZNF385AQ96PM9 386 aaKnown RBP13.1□□□□□ -0.31
CLRN1-203ENST00000328863 ALKBH3Q96Q83 286 aaPredicted RBP13.1□□□□□ -0.31
CLRN1-203ENST00000328863 NGBQ9NPG2 151 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 NANSQ9NR45 359 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 B3GAT1Q9P2W7 334 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 SEC14L4Q9UDX3 406 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 RIMS3Q9UJD0 308 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 ZNF229Q9UJW7 825 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 EDARQ9UNE0 448 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 SNX13Q9Y5W8 968 aa13.1□□□□□ -0.31
CLRN1-203ENST00000328863 CSMD2Q7Z408 3487 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 ANKRD17O75179 2603 aaKnown RBP13.09□□□□□ -0.31
CLRN1-203ENST00000328863 CSMD1Q96PZ7 3565 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 CIB4A0PJX0 185 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 ENO4A6NNW6 628 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 RAD51DO75771 328 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 IGF2P01344 180 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 DNAJA1P31689 397 aaKnown RBP13.09□□□□□ -0.31
CLRN1-203ENST00000328863 CLDN17P56750 224 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 KRTAP10-9P60411 292 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 POU3F1Q03052 451 aaPredicted RBP13.09□□□□□ -0.31
CLRN1-203ENST00000328863 TGFBR3Q03167 851 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 FXNQ16595 210 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 NANOGNBQ7Z5D8 188 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 EPHX4Q8IUS5 362 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 ARHGAP24Q8N264 748 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 TMEM239Q8WW34 195 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 PIK3IP1Q96FE7 263 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 NSL1Q96IY1 281 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 NSMCE2Q96MF7 247 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 HS6ST2Q96MM7 605 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 PRSS27Q9BQR3 290 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 FNDC11Q9BVV2 318 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 A4GNTQ9UNA3 340 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 MED31Q9Y3C7 131 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 NOX1Q9Y5S8 564 aa13.09□□□□□ -0.31
CLRN1-203ENST00000328863 LOC102725191A0A1B0GVB3 256 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 DEFB108AA8MXU0 73 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 ZNF587BE7ETH6 402 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 ARPC2O15144 300 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 TRAF3IP2O43734 574 aaPredicted RBP13.08□□□□□ -0.32
CLRN1-203ENST00000328863 SLC43A1O75387 559 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 CH25HO95992 272 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 MT-ND1P03886 318 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 SELENOPP49908 381 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 UGT2B15P54855 530 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 TRAM2Q15035 370 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 TSC22D1Q15714 1073 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 TIMM23BQ5SRD1 257 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 TSPO2Q5TGU0 170 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 OR7E24Q6IFN5 339 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 TRPM8Q7Z2W7 1104 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 P2RY8Q86VZ1 359 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 CDC20BQ86Y33 519 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 KDM8Q8N371 416 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 C17orf78Q8N4C9 275 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 FAM156AQ8NDB6 213 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 RBM15BQ8NDT2 890 aaKnown RBP13.08□□□□□ -0.32
CLRN1-203ENST00000328863 TMEM255BQ8WV15 326 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 HSD17B8Q92506 261 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 MUCL1Q96DR8 90 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 CDRT15Q96T59 188 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 AMBRA1Q9C0C7 1298 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 GORASP2Q9H8Y8 452 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 SLC7A10Q9NS82 523 aa13.08□□□□□ -0.32
CLRN1-203ENST00000328863 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.07□□□□□ -0.32
CLRN1-203ENST00000328863 HTR3EA5X5Y0 456 aa13.07□□□□□ -0.32
CLRN1-203ENST00000328863 B2RBV5 119 aa13.07□□□□□ -0.32
CLRN1-203ENST00000328863 LRRN3E7EW58 273 aa13.07□□□□□ -0.32
CLRN1-203ENST00000328863 HIST1H2ABP04908 130 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms