RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 ACTR6Q9GZN1 396 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 SERHL2Q9H4I8 314 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 DDX18Q9NVP1 670 aaKnown RBP5.83□□□□□ -1.48
CSTF3-201ENST00000323959 SOCS2O14508 198 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 TPD52L2O43399 206 aaKnown RBP5.83□□□□□ -1.48
CSTF3-201ENST00000323959 CTNSO60931 367 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 TNFAIP8O95379 198 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 NGFP01138 241 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 IGF2P01344 180 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 ALOX5P09917 674 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 RFPL3SP0C7P2 107 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 PORP16435 677 aaPredicted RBP5.83□□□□□ -1.48
CSTF3-201ENST00000323959 CAPGP40121 348 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 RAG2P55895 527 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 SMIM11AP58511 58 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 GABARAPL2P60520 117 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 SRSF4Q08170 494 aaKnown RBP5.83□□□□□ -1.48
CSTF3-201ENST00000323959 MERTKQ12866 999 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 PRICKLE4Q2TBC4 344 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 ZNF750Q32MQ0 723 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 LIN52Q52LA3 116 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 ANKRD34AQ69YU3 496 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 QSOX2Q6ZRP7 698 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 TSEN54Q7Z6J9 526 aaKnown RBP5.83□□□□□ -1.48
CSTF3-201ENST00000323959 GCNT2Q8N0V5 402 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 APCDD1LQ8NCL9 501 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 OR7G1Q8NGA0 311 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 FIG4Q92562 907 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 TSLPQ969D9 159 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 TAMM41Q96BW9 452 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 FOXN4Q96NZ1 517 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 ARHGDIGQ99819 225 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 HIF1ANQ9NWT6 349 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 RPUSD1Q9UJJ7 312 aaKnown RBP5.83□□□□□ -1.48
CSTF3-201ENST00000323959 IFT52Q9Y366 437 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 AP4B1Q9Y6B7 739 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 ALPK2Q86TB3 2170 aa5.83□□□□□ -1.48
CSTF3-201ENST00000323959 HTR3EA5X5Y0 456 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 SAP18O00422 153 aaKnown RBP5.82□□□□□ -1.48
CSTF3-201ENST00000323959 SERPINB7O75635 380 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 NKX2-2O95096 273 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 ZFPL1O95159 310 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 SELEP16581 610 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 PSMB1P20618 241 aaKnown RBP5.82□□□□□ -1.48
CSTF3-201ENST00000323959 MSX2P35548 267 aaPredicted RBP5.82□□□□□ -1.48
CSTF3-201ENST00000323959 CHI3L1P36222 383 aaPredicted RBP5.82□□□□□ -1.48
CSTF3-201ENST00000323959 FUT7Q11130 342 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 SERTAD2Q14140 314 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 PDK3Q15120 406 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 COX20Q5RI15 118 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 TTC23Q5W5X9 447 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 VWA1Q6PCB0 445 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 ADCK2Q7Z695 626 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 RNF130Q86XS8 419 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 ZDHHC13Q8IUH4 622 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 ZDHHC21Q8IVQ6 265 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 SLC43A2Q8N370 569 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 SIGLECL1Q8N7X8 197 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 KCT2Q8NC54 265 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 C17orf47Q8NEP4 570 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 SLC38A5Q8WUX1 472 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 TMBIM1Q969X1 311 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 HSH2DQ96JZ2 352 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 ZNF300Q96RE9 604 aaPredicted RBP5.82□□□□□ -1.48
CSTF3-201ENST00000323959 SLC29A1Q99808 456 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 BPESC1Q9GZL8 116 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 PIGUQ9H490 435 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 ANKHQ9HCJ1 492 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 MGAT4BQ9UQ53 548 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 CLDN16Q9Y5I7 305 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 HECTD4Q9Y4D8 3996 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 IGKV3D-11A0A0A0MRZ8 115 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 SMIM31A0A1B0GVY4 71 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 TMEM247A6NEH6 219 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 SHISA9B4DS77 424 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 G3V2T6 193 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 M0QX08 132 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 RTCAO00442 366 aaKnown RBP5.82□□□□□ -1.48
CSTF3-201ENST00000323959 OR2J2O76002 312 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 ZNF682O95780 498 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 B3GALT4O96024 378 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 CST1P01037 141 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 TFP02787 698 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 GSNP06396 782 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 LYNP07948 512 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 MSMBP08118 114 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 PABPC4LP0CB38 370 aaKnown RBP5.82□□□□□ -1.48
CSTF3-201ENST00000323959 CCL3P10147 92 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 RNH1P13489 461 aaKnown RBP5.82□□□□□ -1.48
CSTF3-201ENST00000323959 ETFAP13804 333 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 MATN1P21941 496 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 CPN2P22792 545 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 KIR2DL2P43627 348 aaPredicted RBP5.82□□□□□ -1.48
CSTF3-201ENST00000323959 NCBP2P52298 156 aaKnown RBP eCLIP5.82□□□□□ -1.483e-7■■□□□ 13.8
CSTF3-201ENST00000323959 CRISP3P54108 245 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 CSNK2BP67870 215 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 BTN3A2P78410 334 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 FUT5Q11128 374 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 BAMBIQ13145 260 aa5.82□□□□□ -1.48
CSTF3-201ENST00000323959 TOP3AQ13472 1001 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms