RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ACVR2AP27037 513 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 ELK4P28324 431 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 OR1E2P47887 323 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 SRSF6Q13247 344 aaKnown RBP7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 OR1Q1Q15612 314 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 APOOLQ6UXV4 268 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 BEND4Q6ZU67 534 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 VASH1Q7L8A9 365 aaPredicted RBP7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 PSD4Q8NDX1 1056 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 OR5B2Q96R09 309 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF426Q9BUY5 554 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 ADAM19Q9H013 955 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 PROK2Q9HC23 129 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 ACER3Q9NUN7 267 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 SHANK1Q9Y566 2161 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 DAPL1A0PJW8 107 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF878C9JN71 531 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 FFAR1O14842 300 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 NEURL1O76050 574 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 NTN1O95631 604 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 SLC1A3P43003 542 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 CLRN1P58418 232 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 OR1C1Q15619 314 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 MICAQ29983 383 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF585AQ6P3V2 769 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF227Q86WZ6 799 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 SLC43A2Q8N370 569 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 OR2M3Q8NG83 312 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 NSMAFQ92636 917 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 MUCL1Q96DR8 90 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF597Q96LX8 424 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 CDH20Q9HBT6 801 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 PALMDQ9NP74 551 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 C15orf41Q9Y2V0 281 aa7.65□□□□□ -1.18
PTPDC1-201ENST00000288976 BCAS1O75363 584 aaPredicted RBP7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 WDPCPO95876 746 aa7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 AZGP1P25311 298 aaKnown RBP7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 RFC3P40938 356 aa7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 EIF1P41567 113 aaKnown RBP7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 MLLT10P55197 1068 aa7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 TIMM50Q3ZCQ8 353 aa7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 CD300LDQ6UXZ3 194 aa7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 C16orf47Q6ZP98 133 aaPredicted RBP7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 GDF7Q7Z4P5 450 aa7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 TMEM178AQ8NBL3 297 aa7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 OR6N2Q8NGY6 317 aa7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 MRGPRX4Q96LA9 322 aa7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 TMEM43Q9BTV4 400 aa7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 POLDIP3Q9BY77 421 aaKnown RBP7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 COMMD4Q9H0A8 199 aa7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 TCF7L1Q9HCS4 588 aa7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 MAN2C1Q9NTJ4 1040 aa7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 ASB6Q9NWX5 421 aa7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 BOKQ9UMX3 212 aaPredicted RBP7.65□□□□□ -1.19
PTPDC1-201ENST00000288976 TRIM64BA6NI03 449 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 G3V2T6 193 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 LINC01387J3KSC0 135 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 SMAD9O15198 467 aaKnown RBP7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 ZNF35P13682 527 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 IGFBP5P24593 272 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 CD96P40200 585 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 POLR2HP52434 150 aaKnown RBP7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 CEBPGP53567 150 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 DSCR4P56555 118 aaPredicted RBP7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 TMEM44Q2T9K0 475 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 TMEM201Q5SNT2 666 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 B3GNTL1Q67FW5 361 aaPredicted RBP7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 FAHD1Q6P587 224 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 ARL9Q6T311 187 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 PLCZ1Q86YW0 608 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 OR5T2Q8NGG2 359 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 TMEM203Q969S6 136 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 PITX2Q99697 317 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 RBM4BQ9BQ04 359 aaKnown RBP7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 RBM4Q9BWF3 364 aaKnown RBP7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 C1QTNF6Q9BXI9 259 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 LRFN1Q9P244 771 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 IL20RAQ9UHF4 553 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 CCL3P10147 92 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 BMP4P12644 408 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 EDN3P14138 238 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 APOBEC1P41238 236 aaKnown RBP7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 COL28A1Q2UY09 1125 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 ALG10Q5BKT4 473 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 DNM1P34Q6PK57 102 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 GRINAQ7Z429 371 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 ZNF845Q96IR2 970 aaPredicted RBP7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 HES7Q9BYE0 225 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 NMNAT1Q9HAN9 279 aaPredicted RBP7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 TMEM5Q9Y2B1 443 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 GRIP1Q9Y3R0 1128 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 A0A1W2PRG6 482 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 PLSCR5A0PG75 271 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 CLDN24A6NM45 220 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 SEMA7AO75326 666 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 CBR3O75828 277 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 TNFAIP8O95379 198 aa7.64□□□□□ -1.19
PTPDC1-201ENST00000288976 LCKP06239 509 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms