RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 TRDV1A0A1B0GX56 115 aa12.65□□□□□ -0.38
LPCAT1-201ENST00000283415 CFIP05156 583 aa12.65□□□□□ -0.38
LPCAT1-201ENST00000283415 KIAA1024LP59773 190 aa12.65□□□□□ -0.38
LPCAT1-201ENST00000283415 NKPD1Q17RQ9 610 aa12.65□□□□□ -0.38
LPCAT1-201ENST00000283415 PLCZ1Q86YW0 608 aa12.65□□□□□ -0.38
LPCAT1-201ENST00000283415 GALNT11Q8NCW6 608 aa12.65□□□□□ -0.38
LPCAT1-201ENST00000283415 OR4C3Q8NH37 302 aa12.65□□□□□ -0.38
LPCAT1-201ENST00000283415 FLVCR1-AS1Q8TAF5 88 aa12.65□□□□□ -0.38
LPCAT1-201ENST00000283415 ZNF775Q96BV0 537 aaPredicted RBP12.65□□□□□ -0.38
LPCAT1-201ENST00000283415 NUDT22Q9BRQ3 303 aa12.65□□□□□ -0.38
LPCAT1-201ENST00000283415 TMEM43Q9BTV4 400 aa12.65□□□□□ -0.38
LPCAT1-201ENST00000283415 DCDC2BA2VCK2 349 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 GPANK1O95872 356 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 IGHA1P01876 353 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 GDNFP39905 211 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 GUCA1AP43080 201 aaPredicted RBP12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 PYHIN1Q6K0P9 492 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 LIN54Q6MZP7 749 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 C16orf47Q6ZP98 133 aaPredicted RBP12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 TMEM151BQ8IW70 566 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 OR5J2Q8NH18 312 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 KIAA1143Q96AT1 154 aaPredicted RBP12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 GTPBP2Q9BX10 602 aaKnown RBP12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 PIGUQ9H490 435 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 OBP2AQ9NY56 170 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 ZNF879B4DU55 563 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 NDUFB2O95178 105 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 LYPD3O95274 346 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 TRAPPC2P0DI81 140 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 TRAPPC2BP0DI82 140 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 CCKBRP32239 447 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 VWA2Q5GFL6 755 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 NDUFAF7Q7L592 441 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 DPY19L4Q7Z388 723 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 LRRC28Q86X40 367 aaPredicted RBP12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 FCAMRQ8WWV6 532 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 BMFQ96LC9 184 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 CNN2Q99439 309 aaKnown RBP12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 ATF6BQ99941 703 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 ARHGAP9Q9BRR9 750 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 RANBP3Q9H6Z4 567 aaPredicted RBP12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 ASB6Q9NWX5 421 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 KLF15Q9UIH9 416 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 TRAV18A0A075B6X5 111 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 A0A1B0GTH9 108 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 HIST1H1CP16403 213 aaKnown RBP12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 GMFBP60983 142 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 ZNF425Q6IV72 752 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 ZNF767PQ75MW2 155 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 KCTD9Q7L273 389 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 PHOSPHO2Q8TCD6 241 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 DVL3Q92997 716 aaPredicted RBP12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 POLEQ07864 2286 aa12.64□□□□□ -0.39
LPCAT1-201ENST00000283415 C13orf42A0A1B0GVH6 325 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 ITGA10O75578 1167 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 SERPINA3P01011 423 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 MAP3K8P41279 467 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 AADACL4Q5VUY2 407 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 KRT77Q7Z794 578 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 C17orf47Q8NEP4 570 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 C14orf105Q9NVL8 296 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 SLC17A4Q9Y2C5 497 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 A0A0B4J293 547 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 HCRTR1O43613 425 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 DNASE1L1P49184 302 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 OR4D9Q8NGE8 314 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.63□□□□□ -0.391e-6■■■□□ 15.8
LPCAT1-201ENST00000283415 NOX4Q9NPH5 578 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 ICE1Q9Y2F5 2266 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 RGS11O94810 467 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 RENP00797 406 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 SMIM10L1P0DMW3 83 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 ANXA7P20073 488 aaKnown RBP12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 RPS4Y1P22090 263 aaKnown RBP12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 PRKXP51817 358 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 AP3S2P59780 193 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 PLCXD2Q0VAA5 305 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.63□□□□□ -0.392e-7■■□□□ 14.5
LPCAT1-201ENST00000283415 PHF19Q5T6S3 580 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 TMEM184AQ6ZMB5 413 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 RCBTB1Q8NDN9 531 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 OR10H5Q8NGA6 315 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 ZFAND1Q8TCF1 268 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 NR4A3Q92570 626 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 TSLPQ969D9 159 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 NXPE2Q96DL1 559 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 SMIM10Q96HG1 83 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 ACOXLQ9NUZ1 547 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 AKAP7Q9P0M2 348 aaPredicted RBP12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 PCDHGB7Q9Y5F8 929 aa12.63□□□□□ -0.39
LPCAT1-201ENST00000283415 K7EQS6 105 aa12.62□□□□□ -0.39
LPCAT1-201ENST00000283415 CXCL3P19876 107 aa12.62□□□□□ -0.39
LPCAT1-201ENST00000283415 NPR2P20594 1047 aa12.62□□□□□ -0.39
LPCAT1-201ENST00000283415 GALP22466 123 aa12.62□□□□□ -0.39
LPCAT1-201ENST00000283415 PCGF3Q3KNV8 242 aa12.62□□□□□ -0.39
LPCAT1-201ENST00000283415 ALG10Q5BKT4 473 aa12.62□□□□□ -0.39
LPCAT1-201ENST00000283415 Q5BKY6 102 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms