RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 PRAMEF26H0Y7S4 382 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 OR10H2O60403 315 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 SNRNP200O75643 2136 aaKnown RBP11.81□□□□□ -0.52
C9orf3-201ENST00000277198 TPPPO94811 219 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 TFP02787 698 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 CEACAM1P13688 526 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 HIST1H1CP16403 213 aaKnown RBP11.81□□□□□ -0.52
C9orf3-201ENST00000277198 CAMK2BQ13554 666 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 COL9A2Q14055 689 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-201ENST00000277198 UBE2NLQ5JXB2 153 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 FAM69AQ5T7M9 428 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 FCRLBQ6BAA4 426 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 SSX6Q7RTT6 188 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 SIAH3Q8IW03 269 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 SLC35F2Q8IXU6 374 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 FAM98AQ8NCA5 519 aaKnown RBP11.81□□□□□ -0.52
C9orf3-201ENST00000277198 SNX33Q8WV41 574 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 HSD17B8Q92506 261 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 PHF21AQ96BD5 680 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 SGTBQ96EQ0 304 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 RADILQ96JH8 1075 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 ELF4Q99607 663 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-201ENST00000277198 PLEKHA1Q9HB21 404 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 BRD7Q9NPI1 651 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 RPS6KB2Q9UBS0 482 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 A0A087WUJ7 227 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 KIR2DS5A0A0G2JLQ3 304 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 A0A0G2JNG1 304 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 A0A1W2PRG6 482 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 KIR2DS3K7RE56 304 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 AKR7A2O43488 359 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 SNAPC5O75971 98 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 ECDO95905 644 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-201ENST00000277198 NGFRP08138 427 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 THEGLP0DJG4 465 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 S1PR1P21453 382 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 NUDT1P36639 197 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 PRPS1P60891 318 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 RPS11P62280 158 aaKnown RBP eCLIP11.81□□□□□ -0.52
C9orf3-201ENST00000277198 SKP1P63208 163 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 SNTB2Q13425 540 aaKnown RBP11.81□□□□□ -0.52
C9orf3-201ENST00000277198 KLF9Q13886 244 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-201ENST00000277198 KIR2DS5Q14953 304 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 ZBTB37Q5TC79 503 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 PRSS41Q7RTY9 318 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 ZAR1Q86SH2 424 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 OR5T3Q8NGG3 340 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 OR5H6Q8NGV6 325 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 ZNF431Q8TF32 576 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-201ENST00000277198 MARVELD3Q96A59 401 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 ZNF578Q96N58 590 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-201ENST00000277198 GPX7Q96SL4 187 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-201ENST00000277198 DDOQ99489 341 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 CPNE7Q9UBL6 633 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 HS3ST3A1Q9Y663 406 aa11.81□□□□□ -0.52
C9orf3-201ENST00000277198 CELSR3Q9NYQ7 3312 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 TRBV23OR9-2A0A075B6M9 112 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 TRAV6A0A075B6T7 132 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 TRBV2A0A0J9YWF9 115 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 TRABD2BA6NFA1 517 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 NAP1L6A6NFF2 107 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 SULT1B1O43704 296 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 PRAF2O60831 178 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 GIFP27352 417 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 SRP9P49458 86 aaKnown RBP11.8□□□□□ -0.52
C9orf3-201ENST00000277198 EMDP50402 254 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 AP3S2P59780 193 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 UBE2IP63279 158 aaKnown RBP11.8□□□□□ -0.52
C9orf3-201ENST00000277198 MRPS10P82664 201 aaKnown RBP11.8□□□□□ -0.52
C9orf3-201ENST00000277198 FOXC1Q12948 553 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 GSG1Q2KHT4 349 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 ALG11Q2TAA5 492 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 COL28A1Q2UY09 1125 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 TP53I3Q53FA7 332 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 Q6ZSR6 202 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 KCTD20Q7Z5Y7 419 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 ZNF440Q8IYI8 595 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 OR11H7Q8NGC8 314 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 OR4K13Q8NH42 304 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 GPBAR1Q8TDU6 330 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 ADAMTS18Q8TE60 1221 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 C15orf40Q8WUR7 153 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 ZMYND19Q96E35 227 aaPredicted RBP11.8□□□□□ -0.52
C9orf3-201ENST00000277198 VSTM2LQ96N03 204 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 PTCHD1Q96NR3 888 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 NMNAT2Q9BZQ4 307 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 ZFP64Q9NPA5 681 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 EVA1BQ9NVM1 165 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 HRASLS2Q9NWW9 162 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 ELF5Q9UKW6 265 aaPredicted RBP11.8□□□□□ -0.52
C9orf3-201ENST00000277198 ZNF337Q9Y3M9 751 aa11.8□□□□□ -0.52
C9orf3-201ENST00000277198 PCDHGA9Q9Y5G4 932 aaKnown RBP11.8□□□□□ -0.52
C9orf3-201ENST00000277198 NOS1APO75052 506 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-201ENST00000277198 GYPBP06028 91 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 CD3GP09693 182 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 H2AFB2P0C5Z0 115 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 ZNF883P0CG24 379 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 SNRPBP14678 240 aaKnown RBP11.79□□□□□ -0.52
C9orf3-201ENST00000277198 AKT2P31751 481 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 OR3A3P47888 321 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms