RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 CXCL2P19875 107 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 MMP15P51511 669 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 DGCR2P98153 550 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 KIAA0895LQ68EN5 471 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 SLITRK4Q8IW52 837 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 GPR27Q9NS67 375 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 PEX14O75381 377 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 TFP02787 698 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 OR10A3P58181 314 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 E2F1Q01094 437 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 DHODHQ02127 395 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 ZNF85Q03923 595 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 ZNF169Q14929 603 aaPredicted RBP20.69■□□□□ 0.9
MCF2L-201ENST00000261963 PRTGQ2VWP7 1150 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 SEZ6L2Q6UXD5 910 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 NPSR1Q6W5P4 371 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 C19orf47Q8N9M1 422 aaKnown RBP20.69■□□□□ 0.9
MCF2L-201ENST00000261963 OR4C6Q8NH72 309 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 COQ8AQ8NI60 647 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 ZFP3Q96NJ6 502 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 C20orf85Q9H1P6 137 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 EVA1AQ9H8M9 152 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 ZNF275Q9NSD4 429 aaPredicted RBP20.69■□□□□ 0.9
MCF2L-201ENST00000261963 COPS3Q9UNS2 423 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 CYP8B1Q9UNU6 501 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 PRELID3BQ9Y3B1 194 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 SPTBP11277 2137 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 SLC9B1P1A6NJY1 282 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 UBL3O95164 117 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 LPLP06858 475 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 ANKRD34CP0C6C1 535 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 ALG10BQ5I7T1 473 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 ARL9Q6T311 187 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 MCATQ8IVS2 390 aaKnown RBP20.68■□□□□ 0.9
MCF2L-201ENST00000261963 STPG2Q8N412 459 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 TRIM2Q9C040 744 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 NKIRAS2Q9NYR9 191 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 GMEB2Q9UKD1 530 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 PLSCR5A0PG75 271 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 MT-ND5P03915 603 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 GYPBP06028 91 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 GUSBP08236 651 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 FGF2P09038 288 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 RBM34P42696 430 aaKnown RBP20.68■□□□□ 0.9
MCF2L-201ENST00000261963 CCR5P51681 352 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 LINC00114Q6XXX2 140 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 ZDHHC1Q8WTX9 485 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 ST8SIA2Q92186 375 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 ING1Q9UK53 422 aaPredicted RBP20.68■□□□□ 0.9
MCF2L-201ENST00000261963 MRPS7Q9Y2R9 242 aaKnown RBP20.68■□□□□ 0.9
MCF2L-201ENST00000261963 CLDN16Q9Y5I7 305 aa20.68■□□□□ 0.9
MCF2L-201ENST00000261963 PDCD5O14737 125 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 FOXS1O43638 330 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 CDC123O75794 336 aaPredicted RBP20.67■□□□□ 0.9
MCF2L-201ENST00000261963 SNAPC5O75971 98 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 LDOC1O95751 146 aaPredicted RBP20.67■□□□□ 0.9
MCF2L-201ENST00000261963 FAM27D1Q5T7N8 215 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 ARMC6Q6NXE6 501 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 TPRA1Q86W33 373 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 BVESQ8NE79 360 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 C17orf47Q8NEP4 570 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 SMPDL3BQ92485 455 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 PEX11GQ96HA9 241 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 SPACA7Q96KW9 195 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 NDC1Q9BTX1 674 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 TRABD2BA6NFA1 517 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 OR2W5A6NFC9 320 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 B4DGG1 531 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 LRRN3E7EW58 273 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 NPIPB9F8W1W9 429 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 PLPP2O43688 288 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 TGM6O95932 706 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 WNT1P04628 370 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 CTSEP14091 401 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 ZNF3P17036 446 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 ZNHIT3Q15649 155 aaPredicted RBP20.67■□□□□ 0.9
MCF2L-201ENST00000261963 KIRREL2Q6UWL6 708 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 RCBTB1Q8NDN9 531 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 C4orf36Q96KX1 117 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 LRRN3Q9H3W5 708 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 SCPEP1Q9HB40 452 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 HAO2Q9NYQ3 351 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 TRIOO75962 3097 aa20.67■□□□□ 0.9
MCF2L-201ENST00000261963 HYAL3O43820 417 aaPredicted RBP20.66■□□□□ 0.9
MCF2L-201ENST00000261963 PRAF2O60831 178 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 POU3F2P20265 443 aaPredicted RBP20.66■□□□□ 0.9
MCF2L-201ENST00000261963 OR12D2P58182 307 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 MAT1AQ00266 395 aaKnown RBP20.66■□□□□ 0.9
MCF2L-201ENST00000261963 DYRK1AQ13627 763 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 ERV3-1Q14264 604 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 GRM7Q14831 915 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 ZNF141Q15928 474 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 ETFDHQ16134 617 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 SSX6Q7RTT6 188 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 SLC44A3Q8N4M1 653 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 NPAS1Q99742 590 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 TTYH1Q9H313 450 aaPredicted RBP20.66■□□□□ 0.9
MCF2L-201ENST00000261963 SAV1Q9H4B6 383 aaPredicted RBP20.66■□□□□ 0.9
MCF2L-201ENST00000261963 CLEC4AQ9UMR7 237 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 POM121CA8CG34 1229 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms