RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 CLK1P49759 484 aaKnown RBP20.2■□□□□ 0.82
SIX3-201ENST00000260653 MLLT11Q13015 90 aaPredicted RBP20.2■□□□□ 0.82
SIX3-201ENST00000260653 FRMD6Q96NE9 622 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 CHCHD6Q9BRQ6 235 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 ANKRD10Q9NXR5 420 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 C12orf71A8MTZ7 269 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 C11orf98E9PRG8 122 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 SDHAP31040 664 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 CDKN2AP42771 156 aaKnown RBP20.2■□□□□ 0.82
SIX3-201ENST00000260653 RPS3AP61247 264 aaKnown RBP20.2■□□□□ 0.82
SIX3-201ENST00000260653 ATP1A4Q13733 1029 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 ARMC4Q5T2S8 1044 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 LEG1Q6P5S2 330 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 FADS6Q8N9I5 356 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 ZNF485Q8NCK3 441 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 OR5J2Q8NH18 312 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 POC1BQ8TC44 478 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 PAQR8Q8TEZ7 354 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 TSPAN32Q96QS1 320 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 RACGAP1Q9H0H5 632 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 ADGRL4Q9HBW9 690 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 SH2D2AQ9NP31 389 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 SLC6A5Q9Y345 797 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 G3V3Y1 287 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 M0R3G1 203 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 EFNA2O43921 213 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 FOXD2O60548 495 aaPredicted RBP20.19■□□□□ 0.82
SIX3-201ENST00000260653 APEHP13798 732 aaKnown RBP20.19■□□□□ 0.82
SIX3-201ENST00000260653 FOXK1P85037 733 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 TMED1Q13445 227 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 SGCBQ16585 318 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 LIPKQ5VXJ0 399 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 TMEM81Q6P7N7 255 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 C5orf46Q6UWT4 87 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 OR4K17Q8NGC6 315 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 SMAP2Q8WU79 429 aaPredicted RBP20.19■□□□□ 0.82
SIX3-201ENST00000260653 ZNRF4Q8WWF5 429 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 ZMYND19Q96E35 227 aaPredicted RBP20.19■□□□□ 0.82
SIX3-201ENST00000260653 MRGPRX4Q96LA9 322 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 JAM3Q9BX67 310 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 RNF167Q9H6Y7 350 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 PROK2Q9HC23 129 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 ASB6Q9NWX5 421 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 RABL2AQ9UBK7 228 aaPredicted RBP20.19■□□□□ 0.82
SIX3-201ENST00000260653 FTCDNL1E5RQL4 147 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 SERPINA7P05543 415 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 SLC25A53Q5H9E4 307 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 ACBD7Q8N6N7 88 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 OR5M1Q8NGP8 315 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 PRRX2Q99811 253 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 IL17BQ9UHF5 180 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 SPIN1Q9Y657 262 aaPredicted RBP20.19■□□□□ 0.82
SIX3-201ENST00000260653 GVINP1Q7Z2Y8 2422 aa20.19■□□□□ 0.82
SIX3-201ENST00000260653 H3BML4 177 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 SBK2P0C263 348 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 GABREP78334 506 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 MDGA2Q7Z553 956 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 JAZF1Q86VZ6 243 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 OR10H4Q8NGA5 316 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 ZNF417Q8TAU3 575 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 C1GALT1C1Q96EU7 318 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 ZNF587Q96SQ5 575 aaPredicted RBP20.18■□□□□ 0.82
SIX3-201ENST00000260653 CENPOQ9BU64 300 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 ASPNQ9BXN1 380 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 ANGPTL4Q9BY76 406 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 NMNAT2Q9BZQ4 307 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 GRHPRQ9UBQ7 328 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 PNMA8CA0A1B0GUJ8 204 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 OR2T1O43869 369 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 SLC22A10Q63ZE4 541 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 H3F3CQ6NXT2 135 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 PHC2Q8IXK0 858 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 ARHGAP9Q9BRR9 750 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 NDEL1Q9GZM8 345 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 HAO2Q9NYQ3 351 aa20.18■□□□□ 0.82
SIX3-201ENST00000260653 TXNDC12O95881 172 aa20.17■□□□□ 0.82
SIX3-201ENST00000260653 LALBAP00709 142 aa20.17■□□□□ 0.82
SIX3-201ENST00000260653 PLGP00747 810 aaPredicted RBP20.17■□□□□ 0.82
SIX3-201ENST00000260653 SPI1P17947 270 aa20.17■□□□□ 0.82
SIX3-201ENST00000260653 AHCYP23526 432 aa20.17■□□□□ 0.82
SIX3-201ENST00000260653 KRR1Q13601 381 aaKnown RBP20.17■□□□□ 0.82
SIX3-201ENST00000260653 MESTQ5EB52 335 aa20.17■□□□□ 0.82
SIX3-201ENST00000260653 DND1Q8IYX4 353 aaKnown RBP20.17■□□□□ 0.82
SIX3-201ENST00000260653 KLHL36Q8N4N3 616 aa20.17■□□□□ 0.82
SIX3-201ENST00000260653 ZHX1-C8orf76Q96EF9 292 aa20.17■□□□□ 0.82
SIX3-201ENST00000260653 RPRD1BQ9NQG5 326 aaKnown RBP20.17■□□□□ 0.82
SIX3-201ENST00000260653 NDUFB11Q9NX14 153 aa20.17■□□□□ 0.82
SIX3-201ENST00000260653 H7C1C5 153 aa20.17■□□□□ 0.82
SIX3-201ENST00000260653 LIMK1P53667 647 aa20.17■□□□□ 0.82
SIX3-201ENST00000260653 LCN6P62502 163 aa20.17■□□□□ 0.82
SIX3-201ENST00000260653 ACER2Q5QJU3 275 aa20.17■□□□□ 0.82
SIX3-201ENST00000260653 PLCZ1Q86YW0 608 aa20.17■□□□□ 0.82
SIX3-201ENST00000260653 ZFAND2BQ8WV99 257 aa20.17■□□□□ 0.82
SIX3-201ENST00000260653 PSMF1Q92530 271 aa20.17■□□□□ 0.82
SIX3-201ENST00000260653 DDIT4LQ96D03 193 aa20.17■□□□□ 0.82
SIX3-201ENST00000260653 TSSK2Q96PF2 358 aa20.17■□□□□ 0.82
SIX3-201ENST00000260653 PTGES2Q9H7Z7 377 aa20.17■□□□□ 0.82
SIX3-201ENST00000260653 ZNF346Q9UL40 294 aaKnown RBP20.17■□□□□ 0.82
SIX3-201ENST00000260653 N6AMT1Q9Y5N5 214 aa20.17■□□□□ 0.82
SIX3-201ENST00000260653 ZNF208O43345 1280 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms