RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 ARMC6Q6NXE6 501 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 LEG1Q6P5S2 330 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 TAF8Q7Z7C8 310 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 CDH24Q86UP0 819 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 ZNF511Q8NB15 262 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 AVL9Q8NBF6 648 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 OR11G2Q8NGC1 345 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 OR52I2Q8NH67 350 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 GCDHQ92947 438 aaPredicted RBP13.92□□□□□ -0.18
DDX56-201ENST00000258772 Q96M85 177 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 DGAT2Q96PD7 388 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 SORCS2Q96PQ0 1159 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 HRASLSQ9HDD0 168 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 PRTFDC1Q9NRG1 225 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 AKAP7Q9P0M2 348 aaPredicted RBP13.92□□□□□ -0.18
DDX56-201ENST00000258772 POMT2Q9UKY4 750 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 ERVK-19Q9WJR5 959 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 RCE1Q9Y256 329 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 MRPS33Q9Y291 106 aaKnown RBP13.92□□□□□ -0.18
DDX56-201ENST00000258772 V9GY05 133 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 IGKV1D-42A0A075B6H8 117 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 BLOC1S5-TXNDC5H3BN57 136 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 GABARAPH6UMI1 98 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 SERPINI2O75830 405 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 DNASE1P24855 282 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 RABIFP47224 123 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 MAT1AQ00266 395 aaKnown RBP13.91□□□□□ -0.18
DDX56-201ENST00000258772 HHEXQ03014 270 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 PRTGQ2VWP7 1150 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 TMEM255AQ5JRV8 349 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 SERPINA12Q8IW75 414 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 ZNF595Q8IYB9 648 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 GAS2L1Q99501 681 aaPredicted RBP13.91□□□□□ -0.18
DDX56-201ENST00000258772 SLC19A3Q9BZV2 496 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 OR10A5Q9H207 317 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 LIN7BQ9HAP6 207 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 RXFP3Q9NSD7 469 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 WBP1LQ9NX94 342 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 FLVCR2Q9UPI3 526 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 C4orf47A7E2U8 309 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 KHNYNO15037 678 aaKnown RBP13.91□□□□□ -0.18
DDX56-201ENST00000258772 ECDO95905 644 aaPredicted RBP13.91□□□□□ -0.18
DDX56-201ENST00000258772 EN2P19622 333 aaPredicted RBP13.91□□□□□ -0.18
DDX56-201ENST00000258772 PSMB1P20618 241 aaKnown RBP13.91□□□□□ -0.18
DDX56-201ENST00000258772 AQP2P41181 271 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 CLDN12P56749 244 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 ZP1P60852 638 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 HYAL1Q12794 435 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 COL28A1Q2UY09 1125 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 TSSK2Q96PF2 358 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 GPR174Q9BXC1 333 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 EMC3Q9P0I2 261 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 SCP2D1Q9UJQ7 156 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 NPTNQ9Y639 398 aa13.91□□□□□ -0.18
DDX56-201ENST00000258772 A0A087WV48 116 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 TMEM127O75204 238 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 ITGA10O75578 1167 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 GRK6P43250 576 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 MRPS21P82921 87 aaKnown RBP13.9□□□□□ -0.18
DDX56-201ENST00000258772 FUT7Q11130 342 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 EIF2B5Q13144 721 aaKnown RBP13.9□□□□□ -0.18
DDX56-201ENST00000258772 KLHL26Q53HC5 615 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 SLC6A19Q695T7 634 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 ELMOD2Q8IZ81 293 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 OR8H3Q8N146 312 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 C19orf47Q8N9M1 422 aaKnown RBP13.9□□□□□ -0.18
DDX56-201ENST00000258772 OR6C4Q8NGE1 309 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 S100A16Q96FQ6 103 aaKnown RBP13.9□□□□□ -0.18
DDX56-201ENST00000258772 MED30Q96HR3 178 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 MAP6Q96JE9 813 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 SPRTNQ9H040 489 aaPredicted RBP13.9□□□□□ -0.18
DDX56-201ENST00000258772 TSPAN10Q9H1Z9 355 aaPredicted RBP13.9□□□□□ -0.18
DDX56-201ENST00000258772 NANSQ9NR45 359 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 KLHL9Q9P2J3 617 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 KLK11Q9UBX7 282 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 ZNF346Q9UL40 294 aaKnown RBP13.9□□□□□ -0.18
DDX56-201ENST00000258772 TMA7Q9Y2S6 64 aaKnown RBP13.9□□□□□ -0.18
DDX56-201ENST00000258772 GON4LQ3T8J9 2241 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 ALPK2Q86TB3 2170 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 LINC00862A6NCI5 91 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 ELOA3DA6NLF2 546 aaPredicted RBP13.9□□□□□ -0.18
DDX56-201ENST00000258772 CLDN4O14493 209 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 SULT1B1O43704 296 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 KRT33AO76009 404 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 RPP14O95059 124 aaKnown RBP13.9□□□□□ -0.18
DDX56-201ENST00000258772 SEMA4FO95754 770 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 PTH2RP49190 550 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 IKZF1Q13422 519 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 C1orf61Q13536 156 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.9□□□□□ -0.18
DDX56-201ENST00000258772 ELOA3BQ3SY89 546 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 FAM209AQ5JX71 171 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 STPG1Q5TH74 334 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 PWWP2BQ6NUJ5 590 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 STAC2Q6ZMT1 411 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 SLC16A9Q7RTY1 509 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 FAM122BQ7Z309 247 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 KCTD20Q7Z5Y7 419 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 ZNF440Q8IYI8 595 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 ELOA3Q8NG57 546 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms