RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 COMMD3Q9UBI1 195 aa17.95■□□□□ 0.46
PCDHB11-202ENST00000624887 IMPA2O14732 288 aa17.94■□□□□ 0.46
PCDHB11-202ENST00000624887 NAA10P41227 235 aaPredicted RBP17.94■□□□□ 0.46
PCDHB11-202ENST00000624887 SLC3A1Q07837 685 aa17.94■□□□□ 0.46
PCDHB11-202ENST00000624887 NKAIN1Q4KMZ8 207 aa17.94■□□□□ 0.46
PCDHB11-202ENST00000624887 GDPD1Q8N9F7 314 aa17.94■□□□□ 0.46
PCDHB11-202ENST00000624887 NLGN4YQ8NFZ3 816 aaPredicted RBP17.94■□□□□ 0.46
PCDHB11-202ENST00000624887 ST6GALNAC2Q9UJ37 374 aa17.94■□□□□ 0.46
PCDHB11-202ENST00000624887 CDC40O60508 579 aaKnown RBP eCLIP17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 SC5DO75845 299 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 TXNDC12O95881 172 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 IL7P13232 177 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 PGCP20142 388 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 AZGP1P25311 298 aaKnown RBP17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 ITPKBP27987 946 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 SDHAP31040 664 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 CDKN2AP42771 156 aaKnown RBP17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 SLC25A1P53007 311 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 NRG3P56975 720 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 FOXL2P58012 376 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 CTXN1P60606 82 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 TOMM34Q15785 309 aaPredicted RBP17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 CDONQ4KMG0 1287 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 LEG1Q6P5S2 330 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 CCBE1Q6UXH8 406 aaPredicted RBP17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 RPTNQ6XPR3 784 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 C1orf210Q8IVY1 113 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 MAML2Q8IZL2 1156 aaPredicted RBP17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 GHDCQ8N2G8 530 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 SCAIQ8N9R8 606 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 ABHD4Q8TB40 342 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 TAAR8Q969N4 342 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 DEPDC7Q96QD5 511 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 SEMA4CQ9C0C4 833 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 FKRPQ9H9S5 495 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 TIGARQ9NQ88 270 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 FSCN3Q9NQT6 498 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 IGHV5-10-1A0A0J9YXX1 117 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 C17orf51A8MQB3 221 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 FADS1O60427 444 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 GLCEO94923 617 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 TIAF1O95411 115 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 CXCR1P25024 350 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 EVI2BP34910 448 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 HOXD12P35452 270 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 RNF4P78317 190 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 TP53I3Q53FA7 332 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 MZT2AQ6P582 158 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 JAZF1Q86VZ6 243 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 TP53INP1Q96A56 240 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 SLX1AQ9BQ83 275 aa17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 PPIL3Q9H2H8 161 aaKnown RBP17.93■□□□□ 0.46
PCDHB11-202ENST00000624887 IGHV3-20A0A0C4DH32 117 aa17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 OR6C70A6NIJ9 312 aa17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 IDSB3KWA1 339 aa17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 OGG1O15527 345 aa17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 GMFGO60234 142 aa17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 ACVR1BP36896 505 aa17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 CBFBQ13951 182 aa17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 CCDC92Q53HC0 331 aaPredicted RBP17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 LINC01590Q5TEZ4 76 aa17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 PWWP2BQ6NUJ5 590 aa17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 NANOGNBQ7Z5D8 188 aa17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 ANKRD37Q7Z713 158 aa17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 PXKQ7Z7A4 578 aa17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 MS4A15Q8N5U1 240 aa17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 LSM14AQ8ND56 463 aaKnown RBP17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 OR6K6Q8NGW6 343 aa17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 PELI1Q96FA3 418 aa17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 SOSTQ9BQB4 213 aa17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 RARRES3Q9UL19 164 aa17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 GRIP1Q9Y3R0 1128 aa17.92■□□□□ 0.46
PCDHB11-202ENST00000624887 SELENOFO60613 162 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 HPGDSO60760 199 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 TMCC2O75069 709 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 SCRG1O75711 98 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 NUDT14O95848 222 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 HEXBP07686 556 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 SHC1P29353 583 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 TMED10P49755 219 aaKnown RBP17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 GBX2P52951 348 aaPredicted RBP17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 RPL18Q07020 188 aaKnown RBP17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 EMC4Q5J8M3 183 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 CEACAM19Q7Z692 300 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 NR2C2APQ86WQ0 139 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 APCDD1LQ8NCL9 501 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 SNX33Q8WV41 574 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 ACOT12Q8WYK0 555 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 PIGKQ92643 395 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 GHSRQ92847 366 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 TTTY10Q9BZA0 68 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 NDEL1Q9GZM8 345 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 PCDHGB2Q9Y5G2 931 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 ASCC3Q8N3C0 2202 aaKnown RBP17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 KHNYNO15037 678 aaKnown RBP17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 SERPINI2O75830 405 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 HIST1H2ABP04908 130 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 F13BP05160 661 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 GP1BBP13224 206 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 RPS5P46782 204 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms