RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 MRPS18AQ9NVS2 196 aaKnown RBP11.52□□□□□ -0.56
TNFAIP3-209ENST00000619035 CHCHD3Q9NX63 227 aaKnown RBP11.52□□□□□ -0.56
TNFAIP3-209ENST00000619035 SDK2Q58EX2 2172 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 MPDZO75970 2070 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 TMEM72A0PK05 275 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 ANKUB1A6NFN9 424 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 IFNGP01579 166 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 HIST1H2ABP04908 130 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 GYPBP06028 91 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 HIST1H1CP16403 213 aaKnown RBP11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 DLSTP36957 453 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 RPS19P39019 145 aaKnown RBP11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 PRPS1P60891 318 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 RPS25P62851 125 aaKnown RBP11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 ERVK-25P63136 954 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 LTBQ06643 244 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 HIST3H2AQ7L7L0 130 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 NANOGNBQ7Z5D8 188 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 CENPSQ8N2Z9 138 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 ASB15Q8WXK1 588 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 TMEM234Q8WY98 164 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 HIST1H2ACQ93077 130 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 SECISBP2Q96T21 854 aaKnown RBP11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 TM9SF2Q99805 663 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 KATNB1Q9BVA0 655 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 ASPNQ9BXN1 380 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 OR11A1Q9GZK7 315 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 WDR12Q9GZL7 423 aaKnown RBP11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 TPK1Q9H3S4 243 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 FN3KQ9H479 309 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 WDR70Q9NW82 654 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 NDUFB11Q9NX14 153 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 WIF1Q9Y5W5 379 aa11.52□□□□□ -0.57
TNFAIP3-209ENST00000619035 FREM2Q5SZK8 3169 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 IRGMA1A4Y4 181 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 SHISA8B8ZZ34 492 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 F13BP05160 661 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 MRPL3P09001 348 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 TSPAN19P0C672 248 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 PRKCAP17252 672 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 PAICSP22234 425 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 F8A1P23610 371 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 PSMA1P25786 263 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 CASP3P42574 277 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 SUMO3P55854 103 aaPredicted RBP11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 RPS4XP62701 263 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 DNASE1L3Q13609 305 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 ZNF362Q5T0B9 420 aaPredicted RBP11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 RNLSQ5VYX0 342 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 DPY19L2P2Q6ZN68 376 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 Q6ZNX1 250 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 ADGRG3Q86Y34 549 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 ARMC10Q8N2F6 343 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 ATP6V1C2Q8NEY4 427 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 NLGN4YQ8NFZ3 816 aaPredicted RBP11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 OR9Q1Q8NGQ5 310 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 PTP4A1Q93096 173 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 POLE4Q9NR33 117 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 SNTG1Q9NSN8 517 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 GALNT8Q9NY28 637 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 CHRNA9Q9UGM1 479 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 PCNX3Q9H6A9 2034 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 TRAV36DV7A0A075B6V5 113 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 TP53I11O14683 189 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 SULT1C4O75897 302 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 ASAH2BP0C7U1 165 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 PTGDSP41222 190 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 SSR4P51571 173 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 ZNF41P51814 821 aaPredicted RBP11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 INSL4Q14641 139 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 TIMM50Q3ZCQ8 353 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 ALG10Q5BKT4 473 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 C22orf42Q6IC83 251 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 OPN5Q6U736 354 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 DCDC5Q6ZRR9 648 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 MEPCEQ7L2J0 689 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 RPS19BP1Q86WX3 136 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 TMEM156Q8N614 296 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 TMEM99Q8N816 258 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 SYT14Q8NB59 555 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 SNRNP27Q8WVK2 155 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 S100ZQ8WXG8 99 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 RASD2Q96D21 266 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 ZNF649Q9BS31 505 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 BARHL1Q9BZE3 327 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 MMP27Q9H306 513 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 ISG20L2Q9H9L3 353 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 SDHAF3Q9NRP4 125 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 RHBDL2Q9NX52 303 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 SEC14L4Q9UDX3 406 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 STUB1Q9UNE7 303 aa11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 MRPS18BQ9Y676 258 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 CHCHD2Q9Y6H1 151 aaPredicted RBP11.51□□□□□ -0.57
TNFAIP3-209ENST00000619035 TEX13CA0A0J9YWL9 993 aa11.5□□□□□ -0.57
TNFAIP3-209ENST00000619035 A8MVM7 634 aa11.5□□□□□ -0.57
TNFAIP3-209ENST00000619035 CTDSP2O14595 271 aa11.5□□□□□ -0.57
TNFAIP3-209ENST00000619035 PFDN1O60925 122 aa11.5□□□□□ -0.57
TNFAIP3-209ENST00000619035 CLEC2LP0C7M8 214 aa11.5□□□□□ -0.57
TNFAIP3-209ENST00000619035 FTH1P19P0C7X4 201 aa11.5□□□□□ -0.57
TNFAIP3-209ENST00000619035 CPEP16870 476 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms