RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 PURGQ9UJV8 347 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 PCYT1BQ9Y5K3 369 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 C17orf105B2RV13 164 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 H3BML4 177 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 GABARAPH6UMI1 98 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 GPR75O95800 540 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 HOXD9P28356 352 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 MFGE8Q08431 387 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 FAM69BQ5VUD6 431 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 ADAM5Q6NVV9 412 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 FAM26EQ8N5C1 309 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 OR52H1Q8NGJ2 320 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 LKAAEAR1Q8TD35 194 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 BTF3L4Q96K17 158 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 NIPSNAP3BQ9BS92 247 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 NDUFB11Q9NX14 153 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 LHX3Q9UBR4 397 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 APOBEC3BQ9UH17 382 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 A0A087WZY1 265 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 TMEM200CA6NKL6 621 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 MMP11P24347 488 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 ITGB7P26010 798 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 TNFRSF17Q02223 184 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 RAB39BQ96DA2 213 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 C14orf79Q96F83 325 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 GABARAPL3Q9BY60 117 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 OR10A5Q9H207 317 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 OR10A2Q9H208 303 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 PLEK2Q9NYT0 353 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 VSX1Q9NZR4 365 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 NUDT21O43809 227 aaKnown RBP9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 DUX1O43812 170 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 CBR1P16152 277 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 MAKP20794 623 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 XCR1P46094 333 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 DHPSP49366 369 aaPredicted RBP9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 EFNA3P52797 238 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 TLE4Q04727 773 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 SEMA3BQ13214 749 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 CNN3Q15417 329 aaKnown RBP9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 TMEM207Q6UWW9 146 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 SH2D5Q6ZV89 423 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 KLHDC8BQ8IXV7 354 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 CPXM2Q8N436 756 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 FAM160A2Q8N612 972 aaPredicted RBP9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 OR52E1Q8NGJ3 308 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 UBQLN3Q9H347 655 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 ERVMER34-1Q9H9K5 563 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 KPTNQ9Y664 436 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 NUDT19A8MXV4 375 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 AIFM1O95831 613 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 F13BP05160 661 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 ZDHHC11BP0C7U3 371 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 VASPP50552 380 aaPredicted RBP9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 STK11Q15831 433 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 TMEM184AQ6ZMB5 413 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 MDGA2Q7Z553 956 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 TCEAL8Q8IYN2 117 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 MR1Q95460 341 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 RAB3CQ96E17 227 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 NXF5Q9H1B4 397 aaKnown RBP9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 CHRDQ9H2X0 955 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 ATP13A2Q9NQ11 1180 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 UBQLN4Q9NRR5 601 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 UFSP2Q9NUQ7 469 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 ARID1BQ8NFD5 2236 aaPredicted RBP9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 TCRBV5S2A0A599 114 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 HEPACAM2A8MVW5 462 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 KDM4EB2RXH2 506 aaPredicted RBP9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 HHLA1C9JL84 531 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 TIMP2P16035 220 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 SRMP19623 302 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 SERPINA2P20848 420 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 PER3P56645 1201 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 RPS18P62269 152 aaKnown RBP9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 KIAA0141Q14154 515 aaPredicted RBP9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 DPY19L4Q7Z388 723 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 ZNF100Q8IYN0 542 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 SYT17Q9BSW7 474 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 TMEM59Q9BXS4 323 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 SERTAD4Q9NUC0 356 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 ACER3Q9NUN7 267 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 B4GALT7Q9UBV7 327 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 STEAP1Q9UHE8 339 aa9.9□□□□□ -0.82
CLTCL1-209ENST00000617103 OTOL1A6NHN0 477 aaPredicted RBP9.9□□□□□ -0.83
CLTCL1-209ENST00000617103 TMEM189-UBE2V1I3L0A0 370 aa9.9□□□□□ -0.83
CLTCL1-209ENST00000617103 ERVK-16P61578 105 aa9.9□□□□□ -0.83
CLTCL1-209ENST00000617103 RPP30P78346 268 aaKnown RBP9.9□□□□□ -0.83
CLTCL1-209ENST00000617103 OR7A5Q15622 319 aa9.9□□□□□ -0.83
CLTCL1-209ENST00000617103 RBMS3Q6XE24 437 aaKnown RBP9.9□□□□□ -0.83
CLTCL1-209ENST00000617103 C17orf107Q6ZR85 190 aa9.9□□□□□ -0.83
CLTCL1-209ENST00000617103 PRSS45Q7RTY3 260 aa9.9□□□□□ -0.83
CLTCL1-209ENST00000617103 OR9A4Q8NGU2 314 aa9.9□□□□□ -0.83
CLTCL1-209ENST00000617103 SGK3Q96BR1 496 aa9.9□□□□□ -0.83
CLTCL1-209ENST00000617103 CMSS1Q9BQ75 279 aaKnown RBP9.9□□□□□ -0.83
CLTCL1-209ENST00000617103 CBLCQ9ULV8 474 aa9.9□□□□□ -0.83
CLTCL1-209ENST00000617103 TAPBPO15533 448 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 HOXC11O43248 304 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 SEC14L5O43304 696 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 TK1P04183 234 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms