RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 FAM122CQ6P4D5 195 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 RHOXF1Q8NHV9 184 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 LURAP1Q96LR2 239 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 CENPOQ9BU64 300 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 PCDHGA1Q9Y5H4 931 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 NPIPA5A0A0B4J1W7 369 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 NPIPA7E9PJI5 369 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 SLC16A7O60669 478 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 APOA2P02652 100 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 NPIPA8P0DM63 369 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 TMEM59Q9BXS4 323 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 OBP2BQ9NPH6 170 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.96□□□□□ -0.97
CSMD1-217ENST00000602723 BLACEA4D250 179 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 CPMP14384 443 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 PDE7AQ13946 482 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 CLINT1Q14677 625 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 ZNF789Q5FWF6 425 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 COX15Q7KZN9 410 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 ZNF582Q96NG8 517 aaPredicted RBP8.96□□□□□ -0.97
CSMD1-217ENST00000602723 NTMT1Q9BV86 223 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 FN3KRPQ9HA64 309 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 BET1O15155 118 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 IL2RGP31785 369 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 HOXA1P49639 335 aaPredicted RBP8.96□□□□□ -0.97
CSMD1-217ENST00000602723 FJX1Q86VR8 437 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 GGHQ92820 318 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 RAB3CQ96E17 227 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 RNF32Q9H0A6 362 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 ZIC2O95409 532 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-217ENST00000602723 HMGN2P05204 90 aaKnown RBP8.96□□□□□ -0.98
CSMD1-217ENST00000602723 CNR1P21554 472 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 TRA2BP62995 288 aaKnown RBP8.96□□□□□ -0.98
CSMD1-217ENST00000602723 HBA1P69905 142 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 ZNF91Q05481 1191 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 C1orf220Q5T0J3 134 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 PKMYT1Q99640 499 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 FBXL2Q9UKC9 423 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 KDM4EB2RXH2 506 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-217ENST00000602723 F3P13726 295 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 MTCP1P56278 107 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 ZNF252P-AS1Q0IIN9 211 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 PM20D1Q6GTS8 502 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 LRP10Q7Z4F1 713 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 OR6V1Q8N148 313 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 STARD5Q9NSY2 213 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 SUSD2Q9UGT4 822 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 UBL3O95164 117 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 PRPH2P23942 346 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 TAGLNQ01995 201 aaKnown RBP8.96□□□□□ -0.98
CSMD1-217ENST00000602723 SMN1Q16637 294 aaKnown RBP8.96□□□□□ -0.98
CSMD1-217ENST00000602723 SLC35G1Q2M3R5 365 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 ZNF765Q7L2R6 523 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 MCATQ8IVS2 390 aaKnown RBP8.96□□□□□ -0.98
CSMD1-217ENST00000602723 CLDN1O95832 211 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 NTSR1P30989 418 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 POU3F1Q03052 451 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-217ENST00000602723 ZNF92Q03936 586 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 PCYT2Q99447 389 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 C20orf85Q9H1P6 137 aa8.96□□□□□ -0.98
CSMD1-217ENST00000602723 PDCD11Q14690 1871 aaKnown RBP8.96□□□□□ -0.98
CSMD1-217ENST00000602723 HSPB6O14558 160 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 SIX6O95475 246 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 SNAI1O95863 264 aaPredicted RBP8.95□□□□□ -0.98
CSMD1-217ENST00000602723 SCG5P05408 212 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 PTGER1P34995 402 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 GDNFP39905 211 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 EPHA4P54764 986 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 ARG2P78540 354 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 KIR2DS3Q14952 304 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 TMEM71Q6P5X7 295 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 LRRC18Q8N456 261 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 SECTM1Q8WVN6 248 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 UBXN10Q96LJ8 280 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 CASD1Q96PB1 797 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 MAP3K3Q99759 626 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 STEAP1Q9UHE8 339 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 CBLCQ9ULV8 474 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 MAN2B1O00754 1011 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 GPLD1P80108 840 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 MKXQ8IYA7 352 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 C14orf79Q96F83 325 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 UQCC2Q9BRT2 126 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 TGIF2Q9GZN2 237 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 EVA1AQ9H8M9 152 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 UGT2A1Q9Y4X1 527 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 GPRIN2O60269 458 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 SNRPBP14678 240 aaKnown RBP8.95□□□□□ -0.98
CSMD1-217ENST00000602723 CPT2P23786 658 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 F2RL1P55085 397 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 SIAH3Q8IW03 269 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 SLC39A9Q9NUM3 307 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 TUSC2O75896 110 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 HIST1H1TP22492 207 aaPredicted RBP8.95□□□□□ -0.98
CSMD1-217ENST00000602723 TAGLN2P37802 199 aaKnown RBP8.95□□□□□ -0.98
CSMD1-217ENST00000602723 HSD17B7P56937 341 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 RAB11AP62491 216 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 ARL16Q0P5N6 197 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 OPCMLQ14982 345 aa8.95□□□□□ -0.98
CSMD1-217ENST00000602723 STK11Q15831 433 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms