RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 NUP54Q7Z3B4 507 aa10.65□□□□□ -0.7
VRK3-223ENST00000601341 NKAIN4Q8IVV8 208 aa10.65□□□□□ -0.7
VRK3-223ENST00000601341 LAX1Q8IWV1 398 aa10.65□□□□□ -0.7
VRK3-223ENST00000601341 NRMQ8IXM6 262 aa10.65□□□□□ -0.7
VRK3-223ENST00000601341 ZNF440Q8IYI8 595 aa10.65□□□□□ -0.7
VRK3-223ENST00000601341 UBQLNLQ8IYU4 475 aa10.65□□□□□ -0.7
VRK3-223ENST00000601341 OR8H2Q8N162 312 aa10.65□□□□□ -0.7
VRK3-223ENST00000601341 LNX2Q8N448 690 aa10.65□□□□□ -0.7
VRK3-223ENST00000601341 OR52L1Q8NGH7 329 aa10.65□□□□□ -0.7
VRK3-223ENST00000601341 OR4Q3Q8NH05 313 aa10.65□□□□□ -0.7
VRK3-223ENST00000601341 TTC9Q92623 222 aa10.65□□□□□ -0.7
VRK3-223ENST00000601341 NXPE2Q96DL1 559 aa10.65□□□□□ -0.7
VRK3-223ENST00000601341 C1GALT1C1Q96EU7 318 aa10.65□□□□□ -0.7
VRK3-223ENST00000601341 RASL10BQ96S79 203 aa10.65□□□□□ -0.7
VRK3-223ENST00000601341 ZNF649Q9BS31 505 aa10.65□□□□□ -0.7
VRK3-223ENST00000601341 KATNB1Q9BVA0 655 aa10.65□□□□□ -0.7
VRK3-223ENST00000601341 TBL1XR1Q9BZK7 514 aa10.65□□□□□ -0.7
VRK3-223ENST00000601341 ERVK13-1Q9NX77 482 aa10.65□□□□□ -0.7
VRK3-223ENST00000601341 FLRT3Q9NZU0 649 aa10.65□□□□□ -0.7
VRK3-223ENST00000601341 YARS2Q9Y2Z4 477 aaKnown RBP10.65□□□□□ -0.7
VRK3-223ENST00000601341 PTPRBP23467 1997 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 GTPBP1O00178 669 aaKnown RBP10.65□□□□□ -0.71
VRK3-223ENST00000601341 HCN1O60741 890 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 ZNF354AO60765 605 aaPredicted RBP10.65□□□□□ -0.71
VRK3-223ENST00000601341 ITGA10O75578 1167 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 UBL4AP11441 157 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 CTBP2P56545 445 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 HOXC5Q00444 222 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 PLAURQ03405 335 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 CD300CQ08708 224 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 CHAF1BQ13112 559 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 HNRNPA0Q13151 305 aaKnown RBP10.65□□□□□ -0.71
VRK3-223ENST00000601341 BCL2A1Q16548 175 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 SLC30A6Q6NXT4 461 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 APOOLQ6UXV4 268 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 RPS19BP1Q86WX3 136 aaKnown RBP10.65□□□□□ -0.71
VRK3-223ENST00000601341 CDK20Q8IZL9 346 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 ARMC10Q8N2F6 343 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 PHOSPHO1Q8TCT1 267 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 DNAJA4Q8WW22 397 aaPredicted RBP10.65□□□□□ -0.71
VRK3-223ENST00000601341 ACOT12Q8WYK0 555 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 SOSTQ9BQB4 213 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 PRSS27Q9BQR3 290 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 ZNF559Q9BR84 538 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 PRR14Q9BWN1 585 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 SLC22A4Q9H015 551 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 KCNN2Q9H2S1 579 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 UBQLN3Q9H347 655 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 WDR70Q9NW82 654 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 ADAM30Q9UKF2 790 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 SLC7A7Q9UM01 511 aa10.65□□□□□ -0.71
VRK3-223ENST00000601341 A0A1W2PQL4 384 aaPredicted RBP10.64□□□□□ -0.71
VRK3-223ENST00000601341 FABP12A6NFH5 140 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 UNC119BA6NIH7 251 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 ZNF264O43296 627 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 NDUFB5O43674 189 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 FADS1O60427 444 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 FBXO45P0C2W1 286 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 PRG2P13727 222 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 LIFP15018 202 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 SPNP16150 400 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 BMP7P18075 431 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 EVI2BP34910 448 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 RBM34P42696 430 aaKnown RBP10.64□□□□□ -0.71
VRK3-223ENST00000601341 HTR3AP46098 478 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 FBXW4P57775 412 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 MLF1P58340 268 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 RPS25P62851 125 aaKnown RBP10.64□□□□□ -0.71
VRK3-223ENST00000601341 Q0VFX4 171 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 CD226Q15762 336 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 OR2G6Q5TZ20 316 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 FNDC7Q5VTL7 733 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 JMJD6Q6NYC1 403 aaPredicted RBP10.64□□□□□ -0.71
VRK3-223ENST00000601341 MZT2AQ6P582 158 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 OPN5Q6U736 354 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 LYPD8Q6UX82 237 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 GPALPP1Q8IXQ4 340 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 DND1Q8IYX4 353 aaKnown RBP10.64□□□□□ -0.71
VRK3-223ENST00000601341 ACBD7Q8N6N7 88 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 GATSQ8NAP1 163 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 FAM71CQ8NEG0 241 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 GATAD2BQ8WXI9 593 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 SPACA9Q96E40 222 aaPredicted RBP10.64□□□□□ -0.71
VRK3-223ENST00000601341 FER1L6-AS2Q96M78 137 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 TRIM2Q9C040 744 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 MIXL1Q9H2W2 232 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 CDCP1Q9H5V8 836 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 TMEM27Q9HBJ8 222 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 EXOSC3Q9NQT5 275 aaKnown RBP10.64□□□□□ -0.71
VRK3-223ENST00000601341 CTPS2Q9NRF8 586 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 TNFRSF10DQ9UBN6 386 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 CARD8Q9Y2G2 431 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 GPR52Q9Y2T5 361 aa10.64□□□□□ -0.71
VRK3-223ENST00000601341 SLC22A31A6NKX4 558 aa10.63□□□□□ -0.71
VRK3-223ENST00000601341 BHLHE40O14503 412 aa10.63□□□□□ -0.71
VRK3-223ENST00000601341 PAICSP22234 425 aaKnown RBP10.63□□□□□ -0.71
VRK3-223ENST00000601341 GPR4P46093 362 aa10.63□□□□□ -0.71
VRK3-223ENST00000601341 OR2B6P58173 313 aa10.63□□□□□ -0.71
VRK3-223ENST00000601341 TAS2R43P59537 309 aa10.63□□□□□ -0.71
VRK3-223ENST00000601341 FABP5Q01469 135 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms