RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 CASP12Q6UXS9 341 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 TFAP2EQ6VUC0 442 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 WDR88Q6ZMY6 472 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 TRPM8Q7Z2W7 1104 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 CXorf67Q86X51 503 aaPredicted RBP9.84□□□□□ -0.83
LIG1-211ENST00000596457 NKAIN4Q8IVV8 208 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 MFSD8Q8NHS3 518 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 EPYCQ99645 322 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 PTDSS2Q9BVG9 487 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 ASPNQ9BXN1 380 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 AMBRA1Q9C0C7 1298 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 PCDHAC1Q9H158 963 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 GP6Q9HCN6 339 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 ELOVL5Q9NYP7 299 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 CRIM1Q9NZV1 1036 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 SEC14L4Q9UDX3 406 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 RIMS3Q9UJD0 308 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 RPS6KA6Q9UK32 745 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 AQP7P3A6NL99 342 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 C16orf97H3BN30 126 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 M0R082 166 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 GPR171O14626 319 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 CASKO14936 926 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 MRPL33O75394 65 aaKnown RBP9.83□□□□□ -0.84
LIG1-211ENST00000596457 UBOX5O94941 541 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 LYPD3O95274 346 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 CH25HO95992 272 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 BGLAPP02818 100 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 IFNW1P05000 195 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 T-ENOLP0DO92 83 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 UMPSP11172 480 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 NQO1P15559 274 aaKnown RBP9.83□□□□□ -0.84
LIG1-211ENST00000596457 EDNRAP25101 427 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 IFNA8P32881 189 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 PEX19P40855 299 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 OR3A2P47893 321 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 H3F3AP84243 136 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 LTBQ06643 244 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 PMS2P3Q13401 168 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 PDK3Q15120 406 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 FAM69AQ5T7M9 428 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 C5orf46Q6UWT4 87 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 AAED1Q7RTV5 226 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 TMEM200AQ86VY9 491 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 ZNF295-AS1Q8N0V1 137 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 OR9K2Q8NGE7 335 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 ZNF417Q8TAU3 575 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 GEMIN6Q8WXD5 167 aaKnown RBP9.83□□□□□ -0.84
LIG1-211ENST00000596457 WFIKKN1Q96NZ8 548 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 ZNF587Q96SQ5 575 aaPredicted RBP9.83□□□□□ -0.84
LIG1-211ENST00000596457 FANCFQ9NPI8 374 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 UPB1Q9UBR1 384 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 CD300AQ9UGN4 299 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 NDRG3Q9UGV2 375 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 SNX13Q9Y5W8 968 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 FLVCR1Q9Y5Y0 555 aa9.83□□□□□ -0.84
LIG1-211ENST00000596457 IGKV3D-15A0A087WSY6 115 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 SH3D21A4FU49 640 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 FTCDNL1E5RQL4 147 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 C11orf98E9PRG8 122 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 ARPC2O15144 300 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 SERPINI2O75830 405 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 PDE5AO76074 875 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 OR5F1O95221 314 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 HSD17B1P14061 328 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 NTF4P34130 210 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 UGT2B10P36537 528 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 SORDQ00796 357 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 C1DQ13901 141 aaKnown RBP9.82□□□□□ -0.84
LIG1-211ENST00000596457 SLC17A1Q14916 467 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 SWT1Q5T5J6 900 aaKnown RBP9.82□□□□□ -0.84
LIG1-211ENST00000596457 C9orf135Q5VTT2 229 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 NIPAL3Q6P499 406 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 CYP2R1Q6VVX0 501 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 LINC00114Q6XXX2 140 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 H1FNTQ75WM6 255 aaPredicted RBP9.82□□□□□ -0.84
LIG1-211ENST00000596457 PFN4Q8NHR9 129 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 TMEM255BQ8WV15 326 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 APH1AQ96BI3 265 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 POM121Q96HA1 1249 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 MPP4Q96JB8 637 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 NSMCE2Q96MF7 247 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 MOGAT1Q96PD6 335 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 ZNF385AQ96PM9 386 aaKnown RBP9.82□□□□□ -0.84
LIG1-211ENST00000596457 PRSS27Q9BQR3 290 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 TMEM43Q9BTV4 400 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 MED18Q9BUE0 208 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 FNDC11Q9BVV2 318 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 DCAF13Q9NV06 445 aaKnown RBP9.82□□□□□ -0.84
LIG1-211ENST00000596457 KCNN3Q9UGI6 736 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 MAGEL2Q9UJ55 1249 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 SAMD4AQ9UPU9 718 aaKnown RBP9.82□□□□□ -0.84
LIG1-211ENST00000596457 RASD1Q9Y272 281 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 PKDREJQ9NTG1 2253 aa9.82□□□□□ -0.84
LIG1-211ENST00000596457 HIVEP1P15822 2718 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 MS4A18H0YCH9 400 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 hCG_2039718K7EN88 272 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 PIP5K1CO60331 668 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 LYZL6O75951 148 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 KRT33AO76009 404 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms