RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 VCX3AQ9NNX9 186 aa13.37□□□□□ -0.27
DDX49-204ENST00000595858 ERRFI1Q9UJM3 462 aaPredicted RBP13.37□□□□□ -0.27
DDX49-204ENST00000595858 MED31Q9Y3C7 131 aa13.37□□□□□ -0.27
DDX49-204ENST00000595858 COMMD3-BMI1R4GMX3 469 aa13.37□□□□□ -0.27
DDX49-204ENST00000595858 DIDO1Q9BTC0 2240 aaKnown RBP13.37□□□□□ -0.27
DDX49-204ENST00000595858 PCNX1Q96RV3 2341 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 SMAD9O15198 467 aaKnown RBP13.36□□□□□ -0.27
DDX49-204ENST00000595858 RCBTB2O95199 551 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 IL2RAP01589 272 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 BGLAPP02818 100 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 FCGR2AP12318 317 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 LSM11P83369 360 aaKnown RBP eCLIP13.36□□□□□ -0.27
DDX49-204ENST00000595858 DYNC1I2Q13409 638 aaKnown RBP13.36□□□□□ -0.27
DDX49-204ENST00000595858 RIPPLY2Q5TAB7 128 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 MTFR2Q6P444 385 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 PODNL1Q6PEZ8 512 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 TBPL2Q6SJ96 375 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 PAQR6Q6TCH4 344 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 ACOT11Q8WXI4 607 aaPredicted RBP13.36□□□□□ -0.27
DDX49-204ENST00000595858 CCDC120Q96HB5 630 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 ARHGAP21Q5T5U3 1957 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 TRBV4-1A0A0J9YWV2 114 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 ZNF814B7Z6K7 855 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 LRRN3E7EW58 273 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 FZD7O75084 574 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 AKR7A3O95154 331 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 CBLP22681 906 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 GSTT1P30711 240 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 HMGA2P52926 109 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 ADORA2A-AS1P86434 159 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 MFSD13AQ14CX5 517 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 CNPY1Q3B7I2 92 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 FGD3Q5JSP0 725 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 GTF2IRD2BQ6EKJ0 949 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 OR2T5Q6IEZ7 315 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 ZNF730Q6ZMV8 503 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 GTF2IRD2Q86UP8 949 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 CCDC103Q8IW40 242 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 RNF113BQ8IZP6 322 aaKnown RBP13.36□□□□□ -0.27
DDX49-204ENST00000595858 SLC43A2Q8N370 569 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 C10orf53Q8N6V4 93 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 TMEM99Q8N816 258 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 OR2T29Q8NH02 315 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 RNF128Q8TEB7 428 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 DUS3LQ96G46 650 aaKnown RBP13.36□□□□□ -0.27
DDX49-204ENST00000595858 MOGAT1Q96PD6 335 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 NAA11Q9BSU3 229 aaPredicted RBP13.36□□□□□ -0.27
DDX49-204ENST00000595858 FUZQ9BT04 418 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 C20orf141Q9NUB4 165 aa13.36□□□□□ -0.27
DDX49-204ENST00000595858 MED12LQ86YW9 2145 aa13.35□□□□□ -0.27
DDX49-204ENST00000595858 DOCK7Q96N67 2140 aa13.35□□□□□ -0.27
DDX49-204ENST00000595858 A0A0G2JNJ9 132 aa13.35□□□□□ -0.27
DDX49-204ENST00000595858 CYTIPO60759 359 aa13.35□□□□□ -0.27
DDX49-204ENST00000595858 CH25HO95992 272 aa13.35□□□□□ -0.27
DDX49-204ENST00000595858 CST1P01037 141 aa13.35□□□□□ -0.27
DDX49-204ENST00000595858 IGF2P01344 180 aa13.35□□□□□ -0.27
DDX49-204ENST00000595858 PER3P56645 1201 aa13.35□□□□□ -0.27
DDX49-204ENST00000595858 ZNF74Q16587 644 aa13.35□□□□□ -0.27
DDX49-204ENST00000595858 MBOAT2Q6ZWT7 520 aa13.35□□□□□ -0.27
DDX49-204ENST00000595858 RRM2BQ7LG56 351 aa13.35□□□□□ -0.27
DDX49-204ENST00000595858 NAXEQ8NCW5 288 aa13.35□□□□□ -0.27
DDX49-204ENST00000595858 ABHD3Q8WU67 409 aa13.35□□□□□ -0.27
DDX49-204ENST00000595858 INTS12Q96CB8 462 aaKnown RBP13.35□□□□□ -0.27
DDX49-204ENST00000595858 Q9UFV3 132 aa13.35□□□□□ -0.27
DDX49-204ENST00000595858 PIP5K1CO60331 668 aa13.34□□□□□ -0.27
DDX49-204ENST00000595858 RAMP1O60894 148 aa13.34□□□□□ -0.27
DDX49-204ENST00000595858 TNFAIP8O95379 198 aa13.34□□□□□ -0.27
DDX49-204ENST00000595858 MT-ATP6P00846 226 aa13.34□□□□□ -0.27
DDX49-204ENST00000595858 GTF2E2P29084 291 aaKnown RBP13.34□□□□□ -0.27
DDX49-204ENST00000595858 GRPRP30550 384 aa13.34□□□□□ -0.27
DDX49-204ENST00000595858 SRSF1Q07955 248 aaKnown RBP eCLIP13.34□□□□□ -0.27
DDX49-204ENST00000595858 RNPS1Q15287 305 aaKnown RBP13.34□□□□□ -0.27
DDX49-204ENST00000595858 SEC23BQ15437 767 aa13.34□□□□□ -0.27
DDX49-204ENST00000595858 C11orf91Q3C1V1 193 aa13.34□□□□□ -0.27
DDX49-204ENST00000595858 OTUD3Q5T2D3 398 aaPredicted RBP13.34□□□□□ -0.27
DDX49-204ENST00000595858 OR2A2Q6IF42 318 aa13.34□□□□□ -0.27
DDX49-204ENST00000595858 NRMQ8IXM6 262 aa13.34□□□□□ -0.27
DDX49-204ENST00000595858 GCNT2Q8N0V5 402 aa13.34□□□□□ -0.27
DDX49-204ENST00000595858 SGTBQ96EQ0 304 aa13.34□□□□□ -0.27
DDX49-204ENST00000595858 ZFP3Q96NJ6 502 aa13.34□□□□□ -0.27
DDX49-204ENST00000595858 ALPK1Q96QP1 1244 aa13.34□□□□□ -0.27
DDX49-204ENST00000595858 ZNF696Q9H7X3 374 aa13.34□□□□□ -0.27
DDX49-204ENST00000595858 NANSQ9NR45 359 aa13.34□□□□□ -0.27
DDX49-204ENST00000595858 AP4S1Q9Y587 144 aa13.34□□□□□ -0.27
DDX49-204ENST00000595858 CORINQ9Y5Q5 1042 aa13.34□□□□□ -0.27
DDX49-204ENST00000595858 LYVE1Q9Y5Y7 322 aa13.34□□□□□ -0.27
DDX49-204ENST00000595858 SH3PXD2BA1X283 911 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 HTR3EA5X5Y0 456 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 AQP7P3A6NL99 342 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 HSPB2A8KAH6 182 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 M0R082 166 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 TNFRSF11BO00300 401 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 TMIGD3P0DMS9 266 aaPredicted RBP13.33□□□□□ -0.27
DDX49-204ENST00000595858 IFI30P13284 250 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 RPL5P46777 297 aaKnown RBP13.33□□□□□ -0.27
DDX49-204ENST00000595858 LIMS1P48059 325 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 P2RY4P51582 365 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 PRKCDQ05655 676 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 RASGEF1BQ0VAM2 473 aa13.33□□□□□ -0.27
DDX49-204ENST00000595858 FOXF2Q12947 444 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms