RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 C16orf62Q7Z3J2 963 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 CCDC103Q8IW40 242 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 TRIML2Q8N7C3 387 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 OR9I1Q8NGQ6 314 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 UBASH3BQ8TF42 649 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 WDR60Q8WVS4 1066 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 DYDC1Q8WWB3 177 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 RAB8BQ92930 207 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 SLC6A7Q99884 636 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 SLC7A10Q9NS82 523 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 INTS9Q9NV88 658 aaKnown RBP11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 EMC3Q9P0I2 261 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 ARMCX1Q9P291 453 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 MKLN1Q9UL63 735 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 AMDHD2Q9Y303 409 aa11.91□□□□□ -0.5
SHKBP1-208ENST00000595726 PRAMEF27A3QJZ7 478 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 GTPBP1O00178 669 aaKnown RBP11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 SULT2B1O00204 365 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 HMGN4O00479 90 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 POLR3GO15318 223 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 TGDSO95455 350 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 GSNP06396 782 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 GUSBP08236 651 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 UBL4AP11441 157 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 PPOXP50336 477 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 PRPS1P60891 318 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 SCGB2A2Q13296 93 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 QPRTQ15274 297 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 TIGD2Q4W5G0 525 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 SLC25A53Q5H9E4 307 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 ATAD3BQ5T9A4 648 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 TYW3Q6IPR3 259 aaKnown RBP11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 UGT2A3Q6UWM9 527 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 FRRS1Q6ZNA5 592 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 TMPPEQ6ZT21 453 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 MTDHQ86UE4 582 aaKnown RBP11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 RNF130Q86XS8 419 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 CLDND2Q8NHS1 167 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 XAGE5Q8WWM1 108 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 ROPN1LQ96C74 230 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 JMJD8Q96S16 334 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 DOK1Q99704 481 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 EBF4Q9BQW3 602 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 C1QTNF5Q9BXJ0 243 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 SAP130Q9H0E3 1048 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 TCF7L2Q9NQB0 619 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 POLE3Q9NRF9 147 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 SLC6A13Q9NSD5 602 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 TREM2Q9NZC2 230 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 GRIP1Q9Y3R0 1128 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 WDR45Q9Y484 360 aa11.9□□□□□ -0.5
SHKBP1-208ENST00000595726 RFXANKO14593 260 aa11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 ZNF264O43296 627 aa11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 EIF4E2O60573 245 aaKnown RBP11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 MSMBP08118 114 aa11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 MRPL19P49406 292 aaKnown RBP11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 IDH3AP50213 366 aa11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 SKP2Q13309 424 aa11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 PDK3Q15120 406 aa11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 EFNB3Q15768 340 aa11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 MAPK14Q16539 360 aa11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 TSPO2Q5TGU0 170 aa11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 AP1ARQ63HQ0 302 aa11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 CASP12Q6UXS9 341 aa11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 ZNF621Q6ZSS3 439 aa11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 MSANTD1Q6ZTZ1 278 aa11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 MIER2Q8N344 545 aa11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 TMCO5AQ8N6Q1 288 aa11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 PNPT1Q8TCS8 783 aaKnown RBP11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 CKAP2Q8WWK9 683 aa11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 NEU4Q8WWR8 484 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 C22orf15Q8WYQ4 148 aa11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 UPB1Q9UBR1 384 aa11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 PCDHB14Q9Y5E9 798 aa11.89□□□□□ -0.51
SHKBP1-208ENST00000595726 TMEM129A0AVI4 362 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 hCG_2039718K7EN88 272 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 HKR1P10072 659 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 CCR4P51679 360 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 POLR2JP52435 117 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 MVDP53602 400 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 AQP5P55064 265 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 UBA52P62987 128 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 TXNL4AP83876 142 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 HPCAP84074 193 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 IL1RL1Q01638 556 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 FOXL1Q12952 345 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 ADRM1Q16186 407 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 GTDC1Q4AE62 458 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 GPAT3Q53EU6 434 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 COX20Q5RI15 118 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 C3orf33Q6P1S2 294 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 C17orf78Q8N4C9 275 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 FAM71CQ8NEG0 241 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 OR5W2Q8NH69 310 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 OIT3Q8WWZ8 545 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 TAF15Q92804 592 aaKnown RBP eCLIP11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 VPS33AQ96AX1 596 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 MAGEB18Q96M61 343 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 KCNS3Q9BQ31 491 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 CCDC28BQ9BUN5 200 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms