RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 USP22Q9UPT9 525 aa8.95□□□□□ -0.98
TPM4-207ENST00000588032 PKDREJQ9NTG1 2253 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 CPSF4LA6NMK7 179 aaKnown RBP8.94□□□□□ -0.98
TPM4-207ENST00000588032 CXCR6O00574 342 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 SHOX2O60902 331 aaPredicted RBP8.94□□□□□ -0.98
TPM4-207ENST00000588032 GMNNO75496 209 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 OR5F1O95221 314 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 COX5AP20674 150 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 GSK3BP49841 420 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 P2RY4P51582 365 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 KRTAP10-9P60411 292 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 KRT72Q14CN4 511 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 SPATS1Q496A3 300 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 ANKRD34AQ69YU3 496 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 CREB3L2Q70SY1 520 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 AAED1Q7RTV5 226 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 ABHD12BQ7Z5M8 362 aaPredicted RBP8.94□□□□□ -0.98
TPM4-207ENST00000588032 GPAT4Q86UL3 456 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 CDC20BQ86Y33 519 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 RBM45Q8IUH3 476 aaKnown RBP8.94□□□□□ -0.98
TPM4-207ENST00000588032 PGAM4Q8N0Y7 254 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 UBE2J2Q8N2K1 259 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 SCAIQ8N9R8 606 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 POMGNT2Q8NAT1 580 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 CCDC197Q8NCU1 140 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 OR4D11Q8NGI4 311 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 SLC41A3Q96GZ6 507 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 TPD52L3Q96J77 140 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 HS6ST2Q96MM7 605 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 ASPNQ9BXN1 380 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 ADA2Q9NZK5 511 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 UPB1Q9UBR1 384 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 MALT1Q9UDY8 824 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 PRSS50Q9UI38 385 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 SLC7A7Q9UM01 511 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 CACNA1DQ01668 2161 aa8.94□□□□□ -0.98
TPM4-207ENST00000588032 HTR3EA5X5Y0 456 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 IGF2P01344 180 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 BGLAPP02818 100 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 HRGP04196 525 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 HOXB1P14653 301 aaPredicted RBP8.93□□□□□ -0.98
TPM4-207ENST00000588032 ZNF43P17038 809 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 GGT1P19440 569 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 IGHV1-2P23083 117 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 GRPRP30550 384 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 NTF4P34130 210 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 RBM34P42696 430 aaKnown RBP8.93□□□□□ -0.98
TPM4-207ENST00000588032 NR1H2P55055 460 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 TAS2R41P59536 307 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 TGFBR3Q03167 851 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 ST3GAL3Q11203 375 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 C1DQ13901 141 aaKnown RBP8.93□□□□□ -0.98
TPM4-207ENST00000588032 BEX5Q5H9J7 111 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 TIMM23BQ5SRD1 257 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 OR7E24Q6IFN5 339 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 C16orf89Q6UX73 402 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 CASP12Q6UXS9 341 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 CBLL1Q75N03 491 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 BHLHA15Q7RTS1 189 aaPredicted RBP8.93□□□□□ -0.98
TPM4-207ENST00000588032 C10orf53Q8N6V4 93 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 ZIC4Q8N9L1 334 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 S100PBPQ96BU1 408 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 MUCL1Q96DR8 90 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 ZC3HAV1LQ96H79 300 aaKnown RBP8.93□□□□□ -0.98
TPM4-207ENST00000588032 ZNF426Q9BUY5 554 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 ARL8BQ9NVJ2 186 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 MRPL39Q9NYK5 338 aaKnown RBP8.93□□□□□ -0.98
TPM4-207ENST00000588032 TAS2R16Q9NYV7 291 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 RIMS3Q9UJD0 308 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 RPS6KA6Q9UK32 745 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 RCE1Q9Y256 329 aa8.93□□□□□ -0.98
TPM4-207ENST00000588032 CIB4A0PJX0 185 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 DEFB108AA8MXU0 73 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 M0R082 166 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 AKAP8O43823 692 aaKnown RBP8.92□□□□□ -0.98
TPM4-207ENST00000588032 KRT33AO76009 404 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 LYPD3O95274 346 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 THY1P04216 161 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 IFNW1P05000 195 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 THBDP07204 575 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 HSD17B1P14061 328 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 NQO1P15559 274 aaKnown RBP8.92□□□□□ -0.98
TPM4-207ENST00000588032 PAX7P23759 505 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 OR1E2P47887 323 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 MXRA7P84157 204 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 FAPQ12884 760 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 PMS2P3Q13401 168 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 IFI44LQ53G44 452 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 SAMD4BQ5PRF9 694 aaKnown RBP8.92□□□□□ -0.98
TPM4-207ENST00000588032 TSPO2Q5TGU0 170 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 GLYATQ6IB77 296 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 DEF8Q6ZN54 512 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 C22orf34Q6ZV56 151 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 FKBP9P1Q75LS8 142 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 PXKQ7Z7A4 578 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 CDH24Q86UP0 819 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 EPHX4Q8IUS5 362 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 P3H2Q8IVL5 708 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 UEVLDQ8IX04 471 aa8.92□□□□□ -0.98
TPM4-207ENST00000588032 FITM2Q8N6M3 262 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms