RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 WDR55Q9H6Y2 383 aaPredicted RBP12.33□□□□□ -0.44
ERCC1-205ENST00000587888 OBP2BQ9NPH6 170 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 SLC6A13Q9NSD5 602 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 HAO1Q9UJM8 370 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 KCNS2Q9ULS6 477 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 ZNF232Q9UNY5 417 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 GPR45Q9Y5Y3 372 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 ATRQ13535 2644 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 IGHV4-61A0A0C4DH41 118 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 SDHDO14521 159 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 RFXANKO14593 260 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 UPK3AO75631 287 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 TGFAP01135 160 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 BCHEP06276 602 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 TFPTP0C1Z6 253 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 OR4A8P0C604 315 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 KITP10721 976 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 IGFBP5P24593 272 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 EPHA3P29320 983 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 P2RY4P51582 365 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 LRRC74AQ0VAA2 488 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 BST1Q10588 318 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 LIN52Q52LA3 116 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 RPS26P11Q5JNZ5 115 aaPredicted RBP12.32□□□□□ -0.44
ERCC1-205ENST00000587888 ATG16L1Q676U5 607 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 NXNQ6DKJ4 435 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 LINGO2Q7L985 606 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 EPHX4Q8IUS5 362 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 KIRREL3Q8IZU9 778 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 BOD1Q96IK1 185 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 ALKBH3Q96Q83 286 aaPredicted RBP12.32□□□□□ -0.44
ERCC1-205ENST00000587888 PIF1Q9H611 641 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 SSU72Q9NP77 194 aaKnown RBP12.32□□□□□ -0.44
ERCC1-205ENST00000587888 CA10Q9NS85 328 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 P2RX2Q9UBL9 471 aa12.32□□□□□ -0.44
ERCC1-205ENST00000587888 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.32□□□□□ -0.44
ERCC1-205ENST00000587888 V9GYY5 206 aaPredicted RBP12.32□□□□□ -0.44
ERCC1-205ENST00000587888 CUBNO60494 3623 aa12.31□□□□□ -0.44
ERCC1-205ENST00000587888 LOC390937A0A1W2PQ73 354 aa12.31□□□□□ -0.44
ERCC1-205ENST00000587888 B9A039 149 aa12.31□□□□□ -0.44
ERCC1-205ENST00000587888 NDUFS8O00217 210 aa12.31□□□□□ -0.44
ERCC1-205ENST00000587888 SLC22A3O75751 556 aa12.31□□□□□ -0.44
ERCC1-205ENST00000587888 VAMP5O95183 116 aa12.31□□□□□ -0.44
ERCC1-205ENST00000587888 ANP32DO95626 131 aa12.31□□□□□ -0.44
ERCC1-205ENST00000587888 CECR9P0C854 216 aa12.31□□□□□ -0.44
ERCC1-205ENST00000587888 HOXC5Q00444 222 aa12.31□□□□□ -0.44
ERCC1-205ENST00000587888 NAAAQ02083 359 aa12.31□□□□□ -0.44
ERCC1-205ENST00000587888 LARS2Q15031 903 aaKnown RBP12.31□□□□□ -0.44
ERCC1-205ENST00000587888 ADIPOQQ15848 244 aa12.31□□□□□ -0.44
ERCC1-205ENST00000587888 PRAMEF8Q5VWM4 474 aa12.31□□□□□ -0.44
ERCC1-205ENST00000587888 PRAMEF7Q5VXH5 474 aa12.31□□□□□ -0.44
ERCC1-205ENST00000587888 ANKRD42Q8N9B4 389 aa12.31□□□□□ -0.44
ERCC1-205ENST00000587888 SLC38A5Q8WUX1 472 aa12.31□□□□□ -0.44
ERCC1-205ENST00000587888 KATNB1Q9BVA0 655 aa12.31□□□□□ -0.44
ERCC1-205ENST00000587888 SEC61A2Q9H9S3 476 aa12.31□□□□□ -0.44
ERCC1-205ENST00000587888 CALML5Q9NZT1 146 aa12.31□□□□□ -0.44
ERCC1-205ENST00000587888 ZNF443Q9Y2A4 671 aaPredicted RBP12.31□□□□□ -0.44
ERCC1-205ENST00000587888 FRS3O43559 492 aa12.3□□□□□ -0.44
ERCC1-205ENST00000587888 IL6P05231 212 aa12.3□□□□□ -0.44
ERCC1-205ENST00000587888 CALCRP30988 508 aa12.3□□□□□ -0.44
ERCC1-205ENST00000587888 RPS5P46782 204 aaKnown RBP12.3□□□□□ -0.44
ERCC1-205ENST00000587888 MVDP53602 400 aa12.3□□□□□ -0.44
ERCC1-205ENST00000587888 CRISP3P54108 245 aa12.3□□□□□ -0.44
ERCC1-205ENST00000587888 CLDN17P56750 224 aa12.3□□□□□ -0.44
ERCC1-205ENST00000587888 DSTNP60981 165 aa12.3□□□□□ -0.44
ERCC1-205ENST00000587888 ARF1P84077 181 aaKnown RBP12.3□□□□□ -0.44
ERCC1-205ENST00000587888 ROR2Q01974 943 aaKnown RBP12.3□□□□□ -0.44
ERCC1-205ENST00000587888 HHATQ5VTY9 493 aa12.3□□□□□ -0.44
ERCC1-205ENST00000587888 WDR93Q6P2C0 686 aa12.3□□□□□ -0.44
ERCC1-205ENST00000587888 SERPINA11Q86U17 422 aa12.3□□□□□ -0.44
ERCC1-205ENST00000587888 ZCCHC24Q8N2G6 241 aaKnown RBP12.3□□□□□ -0.44
ERCC1-205ENST00000587888 C19orf24Q9BVV8 132 aa12.3□□□□□ -0.44
ERCC1-205ENST00000587888 SPATA9Q9BWV2 254 aa12.3□□□□□ -0.44
ERCC1-205ENST00000587888 RAB1BQ9H0U4 201 aa12.3□□□□□ -0.44
ERCC1-205ENST00000587888 TPT1P8Q9HAU6 139 aa12.3□□□□□ -0.44
ERCC1-205ENST00000587888 CACYBPQ9HB71 228 aaKnown RBP12.3□□□□□ -0.44
ERCC1-205ENST00000587888 RASD1Q9Y272 281 aa12.3□□□□□ -0.44
ERCC1-205ENST00000587888 CHST2Q9Y4C5 530 aa12.3□□□□□ -0.44
ERCC1-205ENST00000587888 PLCE1Q9P212 2302 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 MXRA5Q9NR99 2828 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 ARFGEF3Q5TH69 2177 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 ARPC4-TTLL3A0A0A6YYG9 625 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 A0A0G2JPF8 293 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 SH3PXD2BA1X283 911 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 LRP5LA4QPB2 252 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 TMEM247A6NEH6 219 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 OR6C65A6NJZ3 312 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 TRPC5OSA6NMA1 111 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 HNRNPCL2B2RXH8 293 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 HNRNPCL3B7ZW38 293 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 HNRNPCL1O60812 293 aaKnown RBP12.29□□□□□ -0.44
ERCC1-205ENST00000587888 AHSA1O95433 338 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 CELA3BP08861 270 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 HNRNPCL4P0DMR1 293 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 ZNF43P17038 809 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 HNF1AP20823 631 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 THBS2P35442 1172 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 THBS4P35443 961 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 HGFACQ04756 655 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 GTDC1Q4AE62 458 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms