RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 CSRP1P21291 193 aaKnown RBP17.96■□□□□ 0.47
TRIM47-204ENST00000587339 RBMS1P29558 406 aaKnown RBP17.96■□□□□ 0.47
TRIM47-204ENST00000587339 RGS6P49758 472 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 CTXN1P60606 82 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.96■□□□□ 0.47
TRIM47-204ENST00000587339 SLC25A53Q5H9E4 307 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 ARMC4Q5T2S8 1044 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 B3GNTL1Q67FW5 361 aaPredicted RBP17.96■□□□□ 0.47
TRIM47-204ENST00000587339 LRRC75AQ8NAA5 344 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 OR51G2Q8NGK0 314 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 SGCZQ96LD1 299 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 BCL7BQ9BQE9 202 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 WDR70Q9NW82 654 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 TNFRSF10DQ9UBN6 386 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 SLC6A5Q9Y345 797 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 MAP2K6P52564 334 aa17.95■□□□□ 0.46
TRIM47-204ENST00000587339 DBPQ10586 325 aaPredicted RBP17.95■□□□□ 0.46
TRIM47-204ENST00000587339 TMED1Q13445 227 aa17.95■□□□□ 0.46
TRIM47-204ENST00000587339 ACER2Q5QJU3 275 aa17.95■□□□□ 0.46
TRIM47-204ENST00000587339 ZNF468Q5VIY5 522 aaPredicted RBP17.95■□□□□ 0.46
TRIM47-204ENST00000587339 FAM122BQ7Z309 247 aa17.95■□□□□ 0.46
TRIM47-204ENST00000587339 PLCZ1Q86YW0 608 aa17.95■□□□□ 0.46
TRIM47-204ENST00000587339 FADS6Q8N9I5 356 aa17.95■□□□□ 0.46
TRIM47-204ENST00000587339 KISS1RQ969F8 398 aaPredicted RBP17.95■□□□□ 0.46
TRIM47-204ENST00000587339 RELTQ969Z4 430 aa17.95■□□□□ 0.46
TRIM47-204ENST00000587339 DDIT4LQ96D03 193 aa17.95■□□□□ 0.46
TRIM47-204ENST00000587339 RASD2Q96D21 266 aa17.95■□□□□ 0.46
TRIM47-204ENST00000587339 NMNAT3Q96T66 252 aa17.95■□□□□ 0.46
TRIM47-204ENST00000587339 SH2D2AQ9NP31 389 aa17.95■□□□□ 0.46
TRIM47-204ENST00000587339 IL17BQ9UHF5 180 aa17.95■□□□□ 0.46
TRIM47-204ENST00000587339 TEX13CA0A0J9YWL9 993 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.94■□□□□ 0.46
TRIM47-204ENST00000587339 FAM47E-STBD1D6RA91 191 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 ZNF208O43345 1280 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 SERPINI2O75830 405 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 GYPBP06028 91 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 SLC2A5P22732 501 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 CD82P27701 267 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 SDHAP31040 664 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 PEX19P40855 299 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 NFATC3Q12968 1075 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 SGCBQ16585 318 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 SLC6A19Q695T7 634 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 PSD4Q8NDX1 1056 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 OR9Q1Q8NGQ5 310 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 OR5J2Q8NH18 312 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 ADAMTS17Q8TE56 1095 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 C1GALT1C1Q96EU7 318 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 THOC3Q96J01 351 aaKnown RBP17.94■□□□□ 0.46
TRIM47-204ENST00000587339 Q96M85 177 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 RACGAP1Q9H0H5 632 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 ANKRD10Q9NXR5 420 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 GRHPRQ9UBQ7 328 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 SEC14L4Q9UDX3 406 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 PCSK5Q92824 1860 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 TMEM129A0AVI4 362 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 SHISA8B8ZZ34 492 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 LSAMPQ13449 338 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 NPEPL1Q8NDH3 523 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 ATP6V1C2Q8NEY4 427 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 ARL5BQ96KC2 179 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 TAS2R5Q9NYW4 299 aa17.94■□□□□ 0.46
TRIM47-204ENST00000587339 MUC6Q6W4X9 2439 aa17.93■□□□□ 0.46
TRIM47-204ENST00000587339 CCDC182A6NF36 153 aa17.93■□□□□ 0.46
TRIM47-204ENST00000587339 IGHA1P01876 353 aa17.93■□□□□ 0.46
TRIM47-204ENST00000587339 SCG5P05408 212 aa17.93■□□□□ 0.46
TRIM47-204ENST00000587339 LIMS3P0CW19 117 aa17.93■□□□□ 0.46
TRIM47-204ENST00000587339 LIMS4P0CW20 117 aa17.93■□□□□ 0.46
TRIM47-204ENST00000587339 GRPRP30550 384 aa17.93■□□□□ 0.46
TRIM47-204ENST00000587339 WNT4P56705 351 aa17.93■□□□□ 0.46
TRIM47-204ENST00000587339 LSM3P62310 102 aaKnown RBP17.93■□□□□ 0.46
TRIM47-204ENST00000587339 DOC2BQ14184 412 aa17.93■□□□□ 0.46
TRIM47-204ENST00000587339 TSTQ16762 297 aaKnown RBP17.93■□□□□ 0.46
TRIM47-204ENST00000587339 MDGA2Q7Z553 956 aa17.93■□□□□ 0.46
TRIM47-204ENST00000587339 LHFPL3Q86UP9 236 aa17.93■□□□□ 0.46
TRIM47-204ENST00000587339 LSM14AQ8ND56 463 aaKnown RBP17.93■□□□□ 0.46
TRIM47-204ENST00000587339 OR6S1Q8NH40 331 aa17.93■□□□□ 0.46
TRIM47-204ENST00000587339 PSMF1Q92530 271 aa17.93■□□□□ 0.46
TRIM47-204ENST00000587339 IP6K3Q96PC2 410 aa17.93■□□□□ 0.46
TRIM47-204ENST00000587339 ASPNQ9BXN1 380 aa17.93■□□□□ 0.46
TRIM47-204ENST00000587339 PROK2Q9HC23 129 aa17.93■□□□□ 0.46
TRIM47-204ENST00000587339 SERINC1Q9NRX5 453 aa17.93■□□□□ 0.46
TRIM47-204ENST00000587339 ANKRD33BA6NCL7 494 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 CDRT15L2A8MXV6 281 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 H3BML4 177 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 CCRL2O00421 344 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 IMPA2O14732 288 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 SLC22A1O15245 554 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 CEACAM1P13688 526 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 TCEA1P23193 301 aaKnown RBP17.92■□□□□ 0.46
TRIM47-204ENST00000587339 AHCYP23526 432 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 AQP6Q13520 282 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 EMC4Q5J8M3 183 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 DCAF10Q5QP82 559 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 OR2G6Q5TZ20 316 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 JMJD6Q6NYC1 403 aaPredicted RBP17.92■□□□□ 0.46
TRIM47-204ENST00000587339 JAZF1Q86VZ6 243 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 DTX1Q86Y01 620 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 GHDCQ8N2G8 530 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 POC1BQ8TC44 478 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 186.9 ms