RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SCN2BO60939 215 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 TPPPO94811 219 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 SOX30O94993 753 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 CSTAP01040 98 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 CD8AP01732 235 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 IGHV4-39P01824 125 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 FESP07332 822 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 NUDT17P0C025 328 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 PABPC4LP0CB38 370 aaKnown RBP5.48□□□□□ -1.53
NUP88-212ENST00000576708 TFPIP10646 304 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 DDX5P17844 614 aaKnown RBP5.48□□□□□ -1.53
NUP88-212ENST00000576708 PRPS1L1P21108 318 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 IGHV1-2P23083 117 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 RYKP34925 604 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 HTR3AP46098 478 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 OR3A2P47893 321 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 SUMO3P55854 103 aaPredicted RBP5.48□□□□□ -1.53
NUP88-212ENST00000576708 NME5P56597 212 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 CLDN8P56748 225 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 C21orf58P58505 322 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 PPP2R2BQ00005 443 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 EMX2Q04743 252 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 SPOCK1Q08629 439 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 IFFO1Q0D2I5 559 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 FUT5Q11128 374 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 MERTKQ12866 999 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 SKP2Q13309 424 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 ITGADQ13349 1161 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 RIN1Q13671 783 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 CBFBQ13951 182 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 ZNF141Q15928 474 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 ARHGAP11BQ3KRB8 267 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 ZNF672Q499Z4 452 aaPredicted RBP5.48□□□□□ -1.53
NUP88-212ENST00000576708 SLC25A53Q5H9E4 307 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 MBNL2Q5VZF2 373 aaKnown RBP5.48□□□□□ -1.53
NUP88-212ENST00000576708 TNFAIP8L2Q6P589 184 aaPredicted RBP5.48□□□□□ -1.53
NUP88-212ENST00000576708 C16orf87Q6PH81 154 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 ZBTB46Q86UZ6 589 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 SNX32Q86XE0 403 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 NUDCD3Q8IVD9 361 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 IQCF2Q8IXL9 164 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 ZNF781Q8N8C0 355 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 ANKRD42Q8N9B4 389 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 OR4A15Q8NGL6 344 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 XAGE5Q8WWM1 108 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 HSD17B8Q92506 261 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 HTRA1Q92743 480 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 MRGPRX4Q96LA9 322 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 OR14A2Q96R54 314 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 PRPF18Q99633 342 aaKnown RBP5.48□□□□□ -1.53
NUP88-212ENST00000576708 C1QTNF6Q9BXI9 259 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 HDHD5Q9BXW7 423 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 REG4Q9BYZ8 158 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 OR11A1Q9GZK7 315 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 LAT2Q9GZY6 243 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 OR10A4Q9H209 315 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 BCO1Q9HAY6 547 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 HHATLQ9HCP6 504 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 FANCFQ9NPI8 374 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 CTPS2Q9NRF8 586 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 ACER3Q9NUN7 267 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 DCAF16Q9NXF7 216 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.48□□□□□ -1.53
NUP88-212ENST00000576708 V9GYY5 206 aaPredicted RBP5.48□□□□□ -1.53
NUP88-212ENST00000576708 NSD1Q96L73 2696 aaPredicted RBP5.47□□□□□ -1.53
NUP88-212ENST00000576708 A0A1W2PP18 115 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 A0A1W2PRX2 142 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 ERICH4A6NGS2 130 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 SHISA9B4DS77 424 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 SULT2B1O00204 365 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 AP3D1O14617 1153 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 ABCD4O14678 606 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 SSX4O60224 188 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 STX11O75558 287 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 RAD51DO75771 328 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 KRT16P08779 473 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 CCDC159P0C7I6 412 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 VSIG10L2P0DP72 767 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 IDUAP35475 653 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 PGM1P36871 562 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 SERPINB5P36952 375 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 DIO1P49895 249 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 ZNF83P51522 516 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 P2RY6Q15077 328 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 PPA1Q15181 289 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 CHI3L2Q15782 390 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 SPANXN4Q5MJ08 99 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 C9orf135Q5VTT2 229 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 TYW3Q6IPR3 259 aaKnown RBP5.47□□□□□ -1.53
NUP88-212ENST00000576708 HEPHL1Q6MZM0 1159 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 C3orf33Q6P1S2 294 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 MZT2AQ6P582 158 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 FRRS1Q6ZNA5 592 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 TMPPEQ6ZT21 453 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 Q6ZT83 130 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 C16orf62Q7Z3J2 963 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 ZNF100Q8IYN0 542 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 OR8H2Q8N162 312 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 UBE2J2Q8N2K1 259 aa5.47□□□□□ -1.53
NUP88-212ENST00000576708 SLC43A2Q8N370 569 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms