RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SLC18B1Q6NT16 456 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 ZNF773Q6PK81 442 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 SLC35D2Q76EJ3 337 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 MRGPRX4Q96LA9 322 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 GAL3ST1Q99999 423 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 IL17BQ9UHF5 180 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 SH3D21A4FU49 640 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 HTR3EA5X5Y0 456 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 C12orf71A8MTZ7 269 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 EEF1E1-BLOC1S5C9J1V9 151 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 PSMD9O00233 223 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 SLC1A7O00341 560 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 EEF1E1O43324 174 aaKnown RBP9.23□□□□□ -0.93
SMG6-213ENST00000573166 SLC43A1O75387 559 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 OR7A10O76100 309 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 INMTO95050 263 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 MT-ATP6P00846 226 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 MT-ND2P03891 347 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 SMIM10L1P0DMW3 83 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 ITGAMP11215 1152 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 FPR3P25089 353 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 GALNSP34059 522 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 OMPP47874 163 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 SOX2P48431 317 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 RIDAP52758 137 aaKnown RBP9.23□□□□□ -0.93
SMG6-213ENST00000573166 FOXF1Q12946 379 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 MELKQ14680 651 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 SHBQ15464 509 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 WIPI1Q5MNZ9 446 aaPredicted RBP9.23□□□□□ -0.93
SMG6-213ENST00000573166 BICRALQ6AI39 1079 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 SPINK14Q6IE38 97 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 SIMC1Q8NDZ2 872 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 UBASH3BQ8TF42 649 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 HPS1Q92902 700 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 SMIM10Q96HG1 83 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 PGAM5Q96HS1 289 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 LMF1Q96S06 567 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 PLEK2Q9NYT0 353 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 HEATR5BQ9P2D3 2071 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 FITM1A5D6W6 292 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 ALG1L2C9J202 215 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.23□□□□□ -0.93
SMG6-213ENST00000573166 PRODHO43272 600 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 HLA-DPB1P04440 258 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 RBM34P42696 430 aaKnown RBP9.23□□□□□ -0.93
SMG6-213ENST00000573166 ID4P47928 161 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 TAS2R43P59537 309 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 PGBD2Q6P3X8 592 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 MCFD2Q8NI22 146 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 ZFP64Q9NPA5 681 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 FOXJ2Q9P0K8 574 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 OSGIN1Q9UJX0 560 aa9.23□□□□□ -0.93
SMG6-213ENST00000573166 KDM4EB2RXH2 506 aaPredicted RBP9.22□□□□□ -0.93
SMG6-213ENST00000573166 TSC22D2O75157 780 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 SUMO3P55854 103 aaPredicted RBP9.22□□□□□ -0.93
SMG6-213ENST00000573166 KEAP1Q14145 624 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 SLCO6A1Q86UG4 719 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 IZUMO1Q8IYV9 350 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 CAPSLQ8WWF8 208 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 SGCDQ92629 289 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 KLHL15Q96M94 604 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 AKIRIN1Q9H9L7 192 aaPredicted RBP9.22□□□□□ -0.93
SMG6-213ENST00000573166 PCDHGA10Q9Y5H3 936 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 HS3ST3B1Q9Y662 390 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 KIAA1671Q9BY89 1806 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 DPM1O60762 260 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 CRYABP02511 175 aaKnown RBP9.22□□□□□ -0.93
SMG6-213ENST00000573166 IL32P24001 234 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 CDK5R2Q13319 367 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.22□□□□□ -0.93
SMG6-213ENST00000573166 ZNF791Q3KP31 576 aaPredicted RBP9.22□□□□□ -0.93
SMG6-213ENST00000573166 ZNF57Q68EA5 555 aaPredicted RBP9.22□□□□□ -0.93
SMG6-213ENST00000573166 TIGD3Q6B0B8 471 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 VASNQ6EMK4 673 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 COX4I2Q96KJ9 171 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 Q96M85 177 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 LRFN5Q96NI6 719 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 COQ7Q99807 217 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 RALGAPA1Q6GYQ0 2036 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 OR5H15A6NDH6 313 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 SHISA8B8ZZ34 492 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 ENTPD6O75354 484 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 APOC1P02654 83 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 MYF6P23409 242 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 DSCR4P56555 118 aaPredicted RBP9.22□□□□□ -0.93
SMG6-213ENST00000573166 RHAGQ02094 409 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 ZNF117Q03924 483 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 SPHARQ15513 63 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 UNQ6126/PRO20091Q6UXV3 157 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 DGAT2L6Q6ZPD8 337 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 GPALPP1Q8IXQ4 340 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 POGLUT1Q8NBL1 392 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 OR8K3Q8NH51 312 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 TFAP2CQ92754 450 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 SLCO4A1Q96BD0 722 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 INTS14Q96SY0 518 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 LANCL2Q9NS86 450 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 SNTG1Q9NSN8 517 aa9.22□□□□□ -0.93
SMG6-213ENST00000573166 A0A087WZY1 265 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 LRRN3E7EW58 273 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms