RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 TMCC3Q9ULS5 477 aa11.29□□□□□ -0.6
NSMCE1-214ENST00000569236 A4GNTQ9UNA3 340 aa11.29□□□□□ -0.6
NSMCE1-214ENST00000569236 TPRKBQ9Y3C4 175 aa11.29□□□□□ -0.6
NSMCE1-214ENST00000569236 PCDHGB1Q9Y5G3 927 aa11.29□□□□□ -0.6
NSMCE1-214ENST00000569236 TRBV4-1A0A0J9YWV2 114 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 A0A1W2PRQ8 180 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 SEC14L5O43304 696 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 MRPS14O60783 128 aaKnown RBP11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 SEC14L2O76054 403 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 CLDN1O95832 211 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 DCKP27707 260 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 CSNK2BP67870 215 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 TEKQ02763 1124 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 DGCR6Q14129 220 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 NEDD8Q15843 81 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 NSUN5P2Q63ZY6 315 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 CHMP1BQ7LBR1 199 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 MAMDC2Q7Z304 686 aaPredicted RBP11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 RBM45Q8IUH3 476 aaKnown RBP11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 CMIPQ8IY22 773 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 FAM71CQ8NEG0 241 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 OR13F1Q8NGS4 319 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 ZFAND2BQ8WV99 257 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 APH1BQ8WW43 257 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 ASB5Q8WWX0 329 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 SMPDL3BQ92485 455 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 SGCDQ92629 289 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 ARSGQ96EG1 525 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 PRRC1Q96M27 445 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 DOK1Q99704 481 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 CACYBPQ9HB71 228 aaKnown RBP11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 CCNB1IP1Q9NPC3 277 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 SCN3BQ9NY72 215 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 RNF6Q9Y252 685 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 HEATR5AQ86XA9 2040 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 CD8B2A6NJW9 211 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 CLDN24A6NM45 220 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 M0R3H8 397 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 XPNPEP2O43895 674 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 WBP4O75554 376 aaKnown RBP11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 CLDN14O95500 239 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 NID1P14543 1247 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 RPS4Y1P22090 263 aaKnown RBP11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 ADH6P28332 368 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 CHRNB4P30926 498 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 PRKAR1BP31321 381 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 FMO3P31513 532 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 FOXF1Q12946 379 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 LSAMPQ13449 338 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 QPRTQ15274 297 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 TOMM34Q15785 309 aaPredicted RBP11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 FGD3Q5JSP0 725 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 RIPPLY2Q5TAB7 128 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 GTF2IRD2BQ6EKJ0 949 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 GTF2IRD2Q86UP8 949 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 CLVS1Q8IUQ0 354 aaPredicted RBP11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 OR6T1Q8NGN1 323 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 OR52P1PQ8NH57 321 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 POC1BQ8TC44 478 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 ISOC1Q96CN7 298 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 NPAS1Q99742 590 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 ARHGDIGQ99819 225 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 CALHM2Q9HA72 323 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 EXOSC3Q9NQT5 275 aaKnown RBP11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 FBXO9Q9UK97 447 aaPredicted RBP11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 MGAT4BQ9UQ53 548 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 SNX5Q9Y5X3 404 aa11.28□□□□□ -0.6
NSMCE1-214ENST00000569236 A0A0G2JNJ9 132 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 SH3PXD2BA1X283 911 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 CLCA1A8K7I4 914 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 KDM4EB2RXH2 506 aaPredicted RBP11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 BCAS1O75363 584 aaPredicted RBP11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 GASTP01350 101 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 IL2RAP01589 272 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 PRKCAP17252 672 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 PGCP20142 388 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 TIMP3P35625 211 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 SUCLG1P53597 346 aaKnown RBP11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 RAC1P63000 192 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 SEC23BQ15437 767 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 ZNF311Q5JNZ3 666 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 DHRS4L2Q6PKH6 230 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 KLHL17Q6TDP4 642 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 SEM1Q6ZVN7 128 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 DEPDC4Q8N2C3 294 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 LINC00471Q8N535 108 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 FAM81AQ8TBF8 368 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 SLC7A13Q8TCU3 470 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 TMEM234Q8WY98 164 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 MRGPRX4Q96LA9 322 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 DGCR6LQ9BY27 220 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 MAN2C1Q9NTJ4 1040 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 Q9UFV3 132 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 ZNF232Q9UNY5 417 aa11.27□□□□□ -0.61
NSMCE1-214ENST00000569236 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 MBD3L4A6NDZ8 208 aaPredicted RBP11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 MBD3L3A6NE82 208 aaPredicted RBP11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 MBD3L5A6NJ08 208 aaPredicted RBP11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 HSPB2A8KAH6 182 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 PTGES3LE9PB15 166 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms