RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	SLC38A5	Q8WUX1	472 aa		5.69	□□□□□ -1.5
TCF4-233	ENST00000566376	CPNE4	Q96A23	557 aa	Predicted RBP	5.69	□□□□□ -1.5
TCF4-233	ENST00000566376	S100PBP	Q96BU1	408 aa		5.69	□□□□□ -1.5
TCF4-233	ENST00000566376	PIK3IP1	Q96FE7	263 aa		5.69	□□□□□ -1.5
TCF4-233	ENST00000566376	TMEM19	Q96HH6	336 aa		5.69	□□□□□ -1.5
TCF4-233	ENST00000566376	ATP6V1G3	Q96LB4	118 aa		5.69	□□□□□ -1.5
TCF4-233	ENST00000566376	TRNT1	Q96Q11	434 aa	Known RBP	5.69	□□□□□ -1.5
TCF4-233	ENST00000566376	PANX1	Q96RD7	426 aa		5.69	□□□□□ -1.5
TCF4-233	ENST00000566376	CPPED1	Q9BRF8	314 aa	Predicted RBP	5.69	□□□□□ -1.5
TCF4-233	ENST00000566376	PTDSS2	Q9BVG9	487 aa		5.69	□□□□□ -1.5
TCF4-233	ENST00000566376	ACTR6	Q9GZN1	396 aa		5.69	□□□□□ -1.5
TCF4-233	ENST00000566376	HOXD1	Q9GZZ0	328 aa		5.69	□□□□□ -1.5
TCF4-233	ENST00000566376	TPT1P8	Q9HAU6	139 aa		5.69	□□□□□ -1.5
TCF4-233	ENST00000566376	POLE3	Q9NRF9	147 aa		5.69	□□□□□ -1.5
TCF4-233	ENST00000566376	ZNF443	Q9Y2A4	671 aa	Predicted RBP	5.69	□□□□□ -1.5
TCF4-233	ENST00000566376	GMEB1	Q9Y692	573 aa		5.69	□□□□□ -1.5
TCF4-233	ENST00000566376		A0A096LNT2	108 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	DPRX	A6NFQ7	191 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	C16orf97	H3BN30	126 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	FXYD1	O00168	92 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	TPST1	O60507	370 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	DIAPH2	O60879	1101 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	SOX30	O94993	753 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	LYPD3	O95274	346 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	PMS2P2	O95744	297 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	NUDT14	O95848	222 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	THY1	P04216	161 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	AMY2A	P04746	511 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	DANCR	P0C864	163 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	IDO1	P14902	403 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	AMY2B	P19961	511 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	RYK	P34925	604 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	EIF1	P41567	113 aa	Known RBP	5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	CLK3	P49761	638 aa	Known RBP	5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	POLR2J	P52435	117 aa	Known RBP	5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	SLC16A1	P53985	500 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	EEFSEC	P57772	596 aa	Known RBP	5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	RAC3	P60763	192 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	DSTN	P60981	165 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	HOXC5	Q00444	222 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	LGALS3BP	Q08380	585 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	MERTK	Q12866	999 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	BNIP2	Q12982	314 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	SGCB	Q16585	318 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	GPAT3	Q53EU6	434 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	RNF220	Q5VTB9	566 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	PPP4R4	Q6NUP7	873 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	TEPP	Q6URK8	271 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	DNM1P46	Q6ZS02	220 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	TMPPE	Q6ZT21	453 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	MSANTD1	Q6ZTZ1	278 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	GRINA	Q7Z429	371 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	MYPOP	Q86VE0	399 aa	Predicted RBP	5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	PTOV1	Q86YD1	416 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	KBTBD8	Q8NFY9	601 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	OR4D11	Q8NGI4	311 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	WDR60	Q8WVS4	1066 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	OIT3	Q8WWZ8	545 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	C3orf49	Q96BT1	292 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	THOC1	Q96FV9	657 aa	Known RBP	5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	ZNF385A	Q96PM9	386 aa	Known RBP	5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	OR5B2	Q96R09	309 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	PRPF18	Q99633	342 aa	Known RBP	5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	MED18	Q9BUE0	208 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	AMBRA1	Q9C0C7	1298 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	KLHL4	Q9C0H6	718 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	SMURF1	Q9HCE7	757 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	ELOVL5	Q9NYP7	299 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	B3GAT1	Q9P2W7	334 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	CHRNA9	Q9UGM1	479 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	MCTS1	Q9ULC4	181 aa	Known RBP	5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	USP22	Q9UPT9	525 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	SLC35A3	Q9Y2D2	325 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	FLVCR1	Q9Y5Y0	555 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	HIVEP2	P31629	2446 aa		5.68	□□□□□ -1.5
TCF4-233	ENST00000566376	COL6A5	A8TX70	2615 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	DOCK11	Q5JSL3	2073 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376		A0A096LPI6	279 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	TMED7-TICAM2	A0A0A6YYA0	188 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	FAM234B	A2RU67	622 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	TRIM64	A6NGJ6	449 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	TRIM64B	A6NI03	449 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	DUXA	A6NLW8	204 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	TRPC5OS	A6NMA1	111 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	ZNF724	A8MTY0	619 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	SHISA9	B4DS77	424 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	GTPBP1	O00178	669 aa	Known RBP	5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	RFXANK	O14593	260 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	EDF1	O60869	148 aa	Known RBP	5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	NDUFS7	O75251	213 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	ERLIN1	O75477	346 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	SLC22A3	O75751	556 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	LYZL6	O75951	148 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	PGM3	O95394	542 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	ADA	P00813	363 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	CD8A	P01732	235 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	IGHV3-9	P01782	118 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	YES1	P07947	543 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	SOD3	P08294	240 aa		5.67	□□□□□ -1.5
TCF4-233	ENST00000566376	HPGD	P15428	266 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms