RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 ARL2BPQ9Y2Y0 163 aa13.59□□□□□ -0.23
CCNDBP1-203ENST00000562553 SH3GLB1Q9Y371 365 aa13.59□□□□□ -0.23
CCNDBP1-203ENST00000562553 ALPK2Q86TB3 2170 aa13.59□□□□□ -0.23
CCNDBP1-203ENST00000562553 ROS1P08922 2347 aa13.58□□□□□ -0.23
CCNDBP1-203ENST00000562553 TRAV36DV7A0A075B6V5 113 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 M0R082 166 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 CHP2O43745 196 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 SHOX2O60902 331 aaPredicted RBP13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 MRPL33O75394 65 aaKnown RBP13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 GOSR1O95249 250 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 PPP3CBP16298 524 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 COX5AP20674 150 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 IL32P24001 234 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 LOXP28300 417 aaPredicted RBP13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 GRPRP30550 384 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 GSK3BP49841 420 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 FOXG1P55316 489 aaPredicted RBP13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 PSME3P61289 254 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 LTBQ06643 244 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 P2RY6Q15077 328 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 SWT1Q5T5J6 900 aaKnown RBP13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 FAM69AQ5T7M9 428 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 FBXW9Q5XUX1 488 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 C5orf46Q6UWT4 87 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 LINC00114Q6XXX2 140 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 BHLHA15Q7RTS1 189 aaPredicted RBP13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 WFDC8Q8IUA0 241 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 UBE2J2Q8N2K1 259 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 KDM8Q8N371 416 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 STEAP2Q8NFT2 490 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 ZNF417Q8TAU3 575 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 ADAMTS16Q8TE57 1224 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 PROX1Q92786 737 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 PIK3IP1Q96FE7 263 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 HS3ST6Q96QI5 342 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 ZNF587Q96SQ5 575 aaPredicted RBP13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 SF3B5Q9BWJ5 86 aaKnown RBP13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 PCDHAC1Q9H158 963 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 OR10A4Q9H209 315 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 PLEKHF2Q9H8W4 249 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 AP3M1Q9Y2T2 418 aa13.58□□□□□ -0.24
CCNDBP1-203ENST00000562553 C2CD3Q4AC94 2353 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 RAI1Q7Z5J4 1906 aaPredicted RBP13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 LRRN3E7EW58 273 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 KLF4O43474 513 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 BGLAPP02818 100 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 GTF2E2P29084 291 aaKnown RBP13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 DNAJA1P31689 397 aaKnown RBP13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 OR1E2P47887 323 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 TMEM225Q6GV28 225 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 ALKBH2Q6NS38 261 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 DEF8Q6ZN54 512 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 EPHX4Q8IUS5 362 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 TMEM45BQ96B21 275 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 MOGAT1Q96PD6 335 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 CCT8L2Q96SF2 557 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 TMEM43Q9BTV4 400 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 HDHD5Q9BXW7 423 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 ALG2Q9H553 416 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 SLC7A10Q9NS82 523 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 ARL8BQ9NVJ2 186 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 FAM53CQ9NYF3 392 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 B3GAT1Q9P2W7 334 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 ABCD2Q9UBJ2 740 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 MALT1Q9UDY8 824 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 BAG5Q9UL15 447 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 SLC7A7Q9UM01 511 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 RASD1Q9Y272 281 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 CADP27708 2225 aa13.57□□□□□ -0.24
CCNDBP1-203ENST00000562553 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.56□□□□□ -0.24
CCNDBP1-203ENST00000562553 TRAPPC13A5PLN9 417 aa13.56□□□□□ -0.24
CCNDBP1-203ENST00000562553 CXCR6O00574 342 aa13.56□□□□□ -0.24
CCNDBP1-203ENST00000562553 OR2T1O43869 369 aa13.56□□□□□ -0.24
CCNDBP1-203ENST00000562553 VAMP5O95183 116 aa13.56□□□□□ -0.24
CCNDBP1-203ENST00000562553 CNOT4O95628 575 aaKnown RBP13.56□□□□□ -0.24
CCNDBP1-203ENST00000562553 IFNA14P01570 189 aa13.56□□□□□ -0.24
CCNDBP1-203ENST00000562553 ITGA5P08648 1049 aa13.56□□□□□ -0.24
CCNDBP1-203ENST00000562553 FAPQ12884 760 aa13.56□□□□□ -0.24
CCNDBP1-203ENST00000562553 TAB1Q15750 504 aa13.56□□□□□ -0.24
CCNDBP1-203ENST00000562553 TSPO2Q5TGU0 170 aa13.56□□□□□ -0.24
CCNDBP1-203ENST00000562553 CREB3L2Q70SY1 520 aa13.56□□□□□ -0.24
CCNDBP1-203ENST00000562553 AAED1Q7RTV5 226 aa13.56□□□□□ -0.24
CCNDBP1-203ENST00000562553 ZNF433Q8N7K0 673 aaPredicted RBP13.56□□□□□ -0.24
CCNDBP1-203ENST00000562553 TPD52L3Q96J77 140 aa13.56□□□□□ -0.24
CCNDBP1-203ENST00000562553 EPYCQ99645 322 aa13.56□□□□□ -0.24
CCNDBP1-203ENST00000562553 PRSS27Q9BQR3 290 aa13.56□□□□□ -0.24
CCNDBP1-203ENST00000562553 ST6GALNAC2Q9UJ37 374 aa13.56□□□□□ -0.24
CCNDBP1-203ENST00000562553 PLEKHA6Q9Y2H5 1048 aa13.56□□□□□ -0.24
CCNDBP1-203ENST00000562553 PDLIM1O00151 329 aa13.55□□□□□ -0.24
CCNDBP1-203ENST00000562553 RAD51DO75771 328 aa13.55□□□□□ -0.24
CCNDBP1-203ENST00000562553 DCTN3O75935 186 aa13.55□□□□□ -0.24
CCNDBP1-203ENST00000562553 NCK1P16333 377 aa13.55□□□□□ -0.24
CCNDBP1-203ENST00000562553 SELENOPP49908 381 aa13.55□□□□□ -0.24
CCNDBP1-203ENST00000562553 LGALS3BPQ08380 585 aa13.55□□□□□ -0.24
CCNDBP1-203ENST00000562553 STK11Q15831 433 aa13.55□□□□□ -0.24
CCNDBP1-203ENST00000562553 C9orf135Q5VTT2 229 aa13.55□□□□□ -0.24
CCNDBP1-203ENST00000562553 SEZ6L2Q6UXD5 910 aa13.55□□□□□ -0.24
CCNDBP1-203ENST00000562553 VTCN1Q7Z7D3 282 aa13.55□□□□□ -0.24
CCNDBP1-203ENST00000562553 OR6S1Q8NH40 331 aa13.55□□□□□ -0.24
CCNDBP1-203ENST00000562553 SLC41A3Q96GZ6 507 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms