RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 UBE2QL1A1L167 161 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 FAM171A2A8MVW0 826 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 ACOT7O00154 380 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 FGF17O60258 216 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 SUSD5O60279 629 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 SIX6O95475 246 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 NAGAP17050 411 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 S100A11P31949 105 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 DIO1P49895 249 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 EMDP50402 254 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 RPS15P62841 145 aaKnown RBP12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 FHL1Q13642 323 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 HLXQ14774 488 aaPredicted RBP12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 NDUFAF6Q330K2 333 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 GXYLT1Q4G148 440 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 STPG1Q5TH74 334 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 OLFML2AQ68BL7 652 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 RGS7BPQ6MZT1 257 aaPredicted RBP12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 PWWP2BQ6NUJ5 590 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 NT5CQ8TCD5 201 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 STACQ99469 402 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 AIFM2Q9BRQ8 373 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 ARL6Q9H0F7 186 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 FXYD6Q9H0Q3 95 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 SLITRK2Q9H156 845 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 TSPAN10Q9H1Z9 355 aaPredicted RBP12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 SRMSQ9H3Y6 488 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 URADA6NGE7 173 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 ANKRD61A6NGH8 418 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 CHURC1-FNTBB4DL54 471 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 LGALS8O00214 317 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 ADAM11O75078 769 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 NDUFB6O95139 128 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 ZFPL1O95159 310 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 NMBP08949 121 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 HNRNPA1P09651 372 aaKnown RBP eCLIP12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 RAB40ALP0C0E4 278 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 CTNNB1P35222 781 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 SOX2P48431 317 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 SEC61A1P61619 476 aaKnown RBP12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 CBFBQ13951 182 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 PSRC1Q6PGN9 363 aaPredicted RBP12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 RAB40AQ8WXH6 277 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 TRIM2Q9C040 744 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 SEMA4CQ9C0C4 833 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 KIR3DX1Q9H7L2 352 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 FBXL3Q9UKT7 428 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 HEBP2Q9Y5Z4 205 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 OR2M5A3KFT3 312 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 SNRPGP15A8MWD9 76 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 GALR3O60755 368 aaPredicted RBP12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 PPM1BO75688 479 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 AK1P00568 194 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 RLN1P04808 185 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 CD1AP06126 327 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 ZNF10P21506 573 aaPredicted RBP12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 MAZP56270 477 aaKnown RBP12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 TAS2R20P59543 309 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 NANOS3P60323 173 aaKnown RBP12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 MRPS10P82664 201 aaKnown RBP12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 GGTLC2Q14390 218 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 TMUB2Q71RG4 321 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 OR1F2PQ96R84 312 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 MYADMQ96S97 322 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 MS4A7Q9GZW8 240 aaPredicted RBP12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 ING1Q9UK53 422 aaPredicted RBP12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 SLC17A4Q9Y2C5 497 aa12.81□□□□□ -0.36
VPS9D1-202ENST00000561976 PYCARD-AS1I3L0S3 204 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 NUPL2O15504 423 aaKnown RBP12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 CTSVO60911 334 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 OR2A4O95047 310 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 IL5P05113 134 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 LPLP06858 475 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 CT62P0C5K7 136 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 SPI1P17947 270 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 RBM34P42696 430 aaKnown RBP12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 RD3Q7Z3Z2 195 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 SLC35F3Q8IY50 421 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 OR5M1Q8NGP8 315 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 SCARB1Q8WTV0 552 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 ZDHHC1Q8WTX9 485 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 HAVCR1Q96D42 359 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 SGTBQ96EQ0 304 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 CAPNS2Q96L46 248 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 ZNF578Q96N58 590 aaPredicted RBP12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 OR2A7Q96R45 310 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 FKRPQ9H9S5 495 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 MKKSQ9NPJ1 570 aaPredicted RBP12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 THAP10Q9P2Z0 257 aaPredicted RBP12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 ENTPD2Q9Y5L3 495 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 SPACA6W5XKT8 324 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 A0A087WV48 116 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 A0A087WV62 115 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 KRBOX1C9JBD0 128 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 SNAPC5O75971 98 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 HIST1H2ABP04908 130 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 DLX5P56178 289 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 PDGFRLQ15198 375 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 FAM78AQ5JUQ0 283 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 ABHD13Q7L211 337 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms