RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 GRPRP30550 384 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 AQP2P41181 271 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 OR2B6P58173 313 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 FXYD6P3P58550 94 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 CTXN1P60606 82 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 RPS4XP62701 263 aaKnown RBP9.29□□□□□ -0.92
USP3-219ENST00000561326 CSNK2A1P68400 391 aaPredicted RBP9.29□□□□□ -0.92
USP3-219ENST00000561326 SLC35A1P78382 337 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 EFNB1P98172 346 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 LTBQ06643 244 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 FOXO1Q12778 655 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 MYBPHQ13203 477 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 SLC10A1Q14973 349 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 OR7A5Q15622 319 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 EMC4Q5J8M3 183 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 TMEM201Q5SNT2 666 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 PDSS1Q5T2R2 415 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 SLC6A19Q695T7 634 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 GPR139Q6DWJ6 353 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 THSD4Q6ZMP0 1018 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 ZNF540Q8NDQ6 660 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 FAM83FQ8NEG4 500 aaPredicted RBP9.29□□□□□ -0.92
USP3-219ENST00000561326 OR5M1Q8NGP8 315 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 OR4Q3Q8NH05 313 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 SCMH1Q96GD3 660 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 DCBLD2Q96PD2 775 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 OR5B2Q96R09 309 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 GPX7Q96SL4 187 aaPredicted RBP9.29□□□□□ -0.92
USP3-219ENST00000561326 NPAS1Q99742 590 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 NAA11Q9BSU3 229 aaPredicted RBP9.29□□□□□ -0.92
USP3-219ENST00000561326 PTDSS2Q9BVG9 487 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 MRPS26Q9BYN8 205 aaKnown RBP9.29□□□□□ -0.92
USP3-219ENST00000561326 OR2B2Q9GZK3 357 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 ENKD1Q9H0I2 346 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 FN3KQ9H479 309 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 VCX3AQ9NNX9 186 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 NRIP3Q9NQ35 241 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 BATF3Q9NR55 127 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 CMC2Q9NRP2 79 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 ALKBH4Q9NXW9 302 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 GRHPRQ9UBQ7 328 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 B3GALT5Q9Y2C3 310 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 RPL36Q9Y3U8 105 aaKnown RBP9.29□□□□□ -0.92
USP3-219ENST00000561326 PCDHGB7Q9Y5F8 929 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 PCDHGA9Q9Y5G4 932 aaKnown RBP9.29□□□□□ -0.92
USP3-219ENST00000561326 HRH3Q9Y5N1 445 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 IER3IP1Q9Y5U9 82 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 SNX5Q9Y5X3 404 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 GTF3C1Q12789 2109 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 A0A1W2PRG6 482 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 IRGMA1A4Y4 181 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 LIPT2A6NK58 231 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 CLCA1A8K7I4 914 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 SHISA8B8ZZ34 492 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 PRR23D1E9PI22 279 aaPredicted RBP9.28□□□□□ -0.92
USP3-219ENST00000561326 PLPP3O14495 311 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 RNF13O43567 381 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 PRKYO43930 277 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 EIF1BO60739 113 aaKnown RBP9.28□□□□□ -0.92
USP3-219ENST00000561326 WISP1O95388 367 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 HPNP05981 417 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 TSPAN19P0C672 248 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 RFPL3SP0C7P2 107 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 PRR23D2P0DMB1 279 aaPredicted RBP9.28□□□□□ -0.92
USP3-219ENST00000561326 ZNF3P17036 446 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 AHCYP23526 432 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 ACVR2AP27037 513 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 UQCRC1P31930 480 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 SFTPDP35247 375 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 PLA2G5P39877 138 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 MEOX1P50221 254 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 PPIAP62937 165 aaKnown RBP9.28□□□□□ -0.92
USP3-219ENST00000561326 TUBA4AP68366 448 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 TLE3Q04726 772 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 RPL18Q07020 188 aaKnown RBP9.28□□□□□ -0.92
USP3-219ENST00000561326 ZP4Q12836 540 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 FHL1Q13642 323 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 BLMHQ13867 455 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 HYAL4Q2M3T9 481 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 KLHL22Q53GT1 634 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 SLC35F1Q5T1Q4 408 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 BORAQ6PGQ7 559 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 IGFL3Q6UXB1 125 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 YRDCQ86U90 279 aaKnown RBP9.28□□□□□ -0.92
USP3-219ENST00000561326 GID4Q8IVV7 300 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 ZFP62Q8NB50 900 aaPredicted RBP9.28□□□□□ -0.92
USP3-219ENST00000561326 ANKK1Q8NFD2 765 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 OTULINQ96BN8 352 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 ZHX1-C8orf76Q96EF9 292 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 ARL5BQ96KC2 179 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 LRR1Q96L50 414 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 SFXN2Q96NB2 322 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 KATNB1Q9BVA0 655 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 HES7Q9BYE0 225 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 TTTY12Q9BZ98 90 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 CHST11Q9NPF2 352 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 TIGARQ9NQ88 270 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 INIPQ9NRY2 104 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 TAS2R5Q9NYW4 299 aa9.28□□□□□ -0.92
USP3-219ENST00000561326 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms