RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 C1orf54Q8WWF1 131 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 HTR3CQ8WXA8 447 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 PRCCQ92733 491 aaPredicted RBP2.62□□□□□ -1.99
VRK1-207ENST00000557352 PEX13Q92968 403 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 OTUB2Q96DC9 234 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 SPATA13Q96N96 652 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 TGS1Q96RS0 853 aaKnown RBP2.62□□□□□ -1.99
VRK1-207ENST00000557352 TMEM121Q9BTD3 319 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 CACNG6Q9BXT2 260 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 DHX35Q9H5Z1 703 aaKnown RBP2.62□□□□□ -1.99
VRK1-207ENST00000557352 EURLQ9NYK6 297 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 PCSK1NQ9UHG2 260 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 V9GYY5 206 aaPredicted RBP2.62□□□□□ -1.99
VRK1-207ENST00000557352 FANCMQ8IYD8 2048 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 CDH23Q9H251 3354 aa2.62□□□□□ -1.99
VRK1-207ENST00000557352 KNL1Q8NG31 2342 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 A0A1W2PRV1 198 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 TRABD2BA6NFA1 517 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 ARHGAP42A6NI28 874 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 GOLGA6L10A6NI86 522 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 GOLGA8KD6RF30 607 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 F5H5T6 163 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 H7C0C1 242 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 PRRG1O14668 218 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 TRDMT1O14717 391 aaKnown RBP2.61□□□□□ -1.99
VRK1-207ENST00000557352 ADAM12O43184 909 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 RIPK2O43353 540 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 COCHO43405 550 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 CDH16O75309 829 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 GMNNO75496 209 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 CLDN11O75508 207 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 AP2A1O95782 977 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 GOT2P00505 430 aaKnown RBP2.61□□□□□ -1.99
VRK1-207ENST00000557352 EPOP01588 193 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 IGHV3-9P01782 118 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 RPL22P35268 128 aaKnown RBP2.61□□□□□ -1.99
VRK1-207ENST00000557352 ATP5OP48047 213 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 PLK1P53350 603 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 PLTPP55058 493 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 CDH4P55283 916 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 NME5P56597 212 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 KIAA1024LP59773 190 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 GBE1Q04446 702 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 WASHC5Q12768 1159 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 TWF1Q12792 350 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 NAB1Q13506 487 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 TRADDQ15628 312 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 PARP6Q2NL67 630 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 ZNF658BQ4V348 819 aaPredicted RBP2.61□□□□□ -1.99
VRK1-207ENST00000557352 TEX44Q53QW1 395 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 HSP90B2PQ58FF3 399 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 DNAJC21Q5F1R6 531 aaKnown RBP2.61□□□□□ -1.99
VRK1-207ENST00000557352 MS4A13Q5J8X5 152 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 RABGAP1LQ5R372 815 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 C10orf120Q5SQS8 335 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 DDI2Q5TDH0 399 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 AGBL2Q5U5Z8 902 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 C1orf189Q5VU69 101 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 STEAP4Q687X5 459 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 LRRC8BQ6P9F7 803 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 LRRC31Q6UY01 552 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 CENPUQ71F23 418 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 LINC00523Q86TU6 105 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 PDIK1LQ8N165 341 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 PYROXD2Q8N2H3 581 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 ATPAF2Q8N5M1 289 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 NPWQ8N729 165 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 TRPV3Q8NET8 790 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 IFT81Q8WYA0 676 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 NDRG1Q92597 394 aaKnown RBP2.61□□□□□ -1.99
VRK1-207ENST00000557352 MRPS31Q92665 395 aaKnown RBP2.61□□□□□ -1.99
VRK1-207ENST00000557352 TADA1Q96BN2 335 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 TLCD1Q96CP7 247 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 C16orf74Q96GX8 76 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 SERPINB12Q96P63 405 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 RUFY1Q96T51 708 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 KIR2DL4Q99706 377 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 SSX3Q99909 188 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 ZYG11BQ9C0D3 744 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 IL22Q9GZX6 179 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 STMN4Q9H169 189 aaPredicted RBP2.61□□□□□ -1.99
VRK1-207ENST00000557352 GBA3Q9H227 469 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 NEUROG2Q9H2A3 272 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 CDC42EP4Q9H3Q1 356 aaKnown RBP2.61□□□□□ -1.99
VRK1-207ENST00000557352 ZDHHC6Q9H6R6 413 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 Q9HAA7 133 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 MRM3Q9HC36 420 aaKnown RBP2.61□□□□□ -1.99
VRK1-207ENST00000557352 ETNK2Q9NVF9 386 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 FAM153AQ9UHL3 310 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 LGALS13Q9UHV8 139 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 CA5BQ9Y2D0 317 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 SNX24Q9Y343 169 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 TEX264Q9Y6I9 313 aa2.61□□□□□ -1.99
VRK1-207ENST00000557352 RAI1Q7Z5J4 1906 aaPredicted RBP2.61□□□□□ -1.99
VRK1-207ENST00000557352 NUP214P35658 2090 aaPredicted RBP2.61□□□□□ -1.99
VRK1-207ENST00000557352 CABIN1Q9Y6J0 2220 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 TRAV19A0A0A6YYK7 116 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.6□□□□□ -1.99
VRK1-207ENST00000557352 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.6□□□□□ -1.99
VRK1-207ENST00000557352 SMIM30A4D0T7 59 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms