RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 TSPAN12O95859 305 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 CHTF8P0CG12 524 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 COX7A1P24310 79 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 CXCR2P25025 360 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 HMGB2P26583 209 aaKnown RBP1.88□□□□□ -2.11
SCFD1-218ENST00000556256 ANXA13P27216 316 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 GNA11P29992 359 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 MAGEA8P43361 318 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 CEBPDP49716 269 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-218ENST00000556256 ATP1B3P54709 279 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 AIF1P55008 147 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 CDK16Q00536 496 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 TGFBR3Q03167 851 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 NCBP1Q09161 790 aaKnown RBP1.88□□□□□ -2.11
SCFD1-218ENST00000556256 OXA1LQ15070 435 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 NSDHLQ15738 373 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 MICBQ29980 383 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 KLHL38Q2WGJ6 581 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 CTRB2Q6GPI1 263 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 PMF1Q6P1K2 205 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 EIF1ADQ8N9N8 165 aaKnown RBP1.88□□□□□ -2.11
SCFD1-218ENST00000556256 FAM83FQ8NEG4 500 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-218ENST00000556256 OR52H1Q8NGJ2 320 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 OR8J1Q8NGP2 316 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 UFD1Q92890 307 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 FGF11Q92914 225 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 C10orf35Q96D05 121 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 TM4SF19Q96DZ7 209 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 ITCHQ96J02 903 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 RBM14Q96PK6 669 aaKnown RBP1.88□□□□□ -2.11
SCFD1-218ENST00000556256 NRTNQ99748 197 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 TSG101Q99816 390 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 CCT7Q99832 543 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 P2RY13Q9BPV8 354 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 NRIP2Q9BQI9 281 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 MRPL45Q9BRJ2 306 aaKnown RBP1.88□□□□□ -2.11
SCFD1-218ENST00000556256 POLR2J2Q9GZM3 115 aaKnown RBP1.88□□□□□ -2.11
SCFD1-218ENST00000556256 POLR2J3Q9H1A7 115 aaKnown RBP1.88□□□□□ -2.11
SCFD1-218ENST00000556256 NARFLQ9H6Q4 476 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 NIPAL2Q9H841 368 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 LRRC40Q9H9A6 602 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 NHEJ1Q9H9Q4 299 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-218ENST00000556256 FN3KRPQ9HA64 309 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 ASF1AQ9Y294 204 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 PIGLQ9Y2B2 252 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 ASB3Q9Y575 518 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 RAI1Q7Z5J4 1906 aaPredicted RBP1.87□□□□□ -2.11
SCFD1-218ENST00000556256 IQANK1A0A1B0GTG1 560 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 A8MXQ7 604 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 POLR2DO15514 142 aaKnown RBP1.87□□□□□ -2.11
SCFD1-218ENST00000556256 RIPK2O43353 540 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 MED7O43513 233 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 IGHDP01880 384 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 OPN1MWP04001 364 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 OPN1MW2P0DN77 364 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 OPN1MW3P0DN78 364 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 NR2C1P13056 603 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 CCDC130P13994 396 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 ATP6V1B2P21281 511 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 CALRP27797 417 aaKnown RBP1.87□□□□□ -2.11
SCFD1-218ENST00000556256 IL12AP29459 219 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 PRDX3P30048 256 aaKnown RBP1.87□□□□□ -2.11
SCFD1-218ENST00000556256 LINC00315P59091 139 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 SEC61GP60059 68 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 TIMM10P62072 90 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 SELENOTP62341 195 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 DGUOKQ16854 277 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 CEP55Q53EZ4 464 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 DMRTC1Q5HYR2 192 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 SAMD4BQ5PRF9 694 aaKnown RBP1.87□□□□□ -2.11
SCFD1-218ENST00000556256 TIGD3Q6B0B8 471 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 KDELC1Q6UW63 502 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 ENPP6Q6UWR7 440 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 TMIGD1Q6UXZ0 262 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 ACP7Q6ZNF0 438 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 EFL1Q7Z2Z2 1120 aaKnown RBP1.87□□□□□ -2.11
SCFD1-218ENST00000556256 RALGPS2Q86X27 583 aaPredicted RBP1.87□□□□□ -2.11
SCFD1-218ENST00000556256 PIANPQ8IYJ0 282 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 DCAF4L2Q8NA75 395 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 BHLHE23Q8NDY6 225 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 FAM110BQ8TC76 370 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 MAIP1Q8WWC4 291 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 FGF14Q92915 247 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 UCN3Q969E3 161 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 NT5C3BQ969T7 300 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 CMTM7Q96FZ5 175 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 TIMD4Q96H15 378 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 RPRD1AQ96P16 312 aaPredicted RBP1.87□□□□□ -2.11
SCFD1-218ENST00000556256 CLCC1Q96S66 551 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 ZBTB18Q99592 522 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 COPS8Q99627 209 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 FAIM2Q9BWQ8 316 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 GON7Q9BXV9 100 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 KRTAP4-1Q9BYQ7 146 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 OR11A1Q9GZK7 315 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 DEFB127Q9H1M4 99 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 AZI2Q9H6S1 392 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 SLC25A22Q9H936 323 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 THUMPD1Q9NXG2 353 aaKnown RBP1.87□□□□□ -2.11
SCFD1-218ENST00000556256 CLCF1Q9UBD9 225 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms