RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 MAPK1IP1LQ8NDC0 245 aa5.91□□□□□ -1.46
PSEN1-216ENST00000556066 OR52N5Q8NH56 324 aa5.91□□□□□ -1.46
PSEN1-216ENST00000556066 LILRB1Q8NHL6 650 aaPredicted RBP5.91□□□□□ -1.46
PSEN1-216ENST00000556066 IGFBPL1Q8WX77 278 aa5.91□□□□□ -1.46
PSEN1-216ENST00000556066 CNOT9Q92600 299 aaKnown RBP5.91□□□□□ -1.46
PSEN1-216ENST00000556066 APH1AQ96BI3 265 aa5.91□□□□□ -1.46
PSEN1-216ENST00000556066 WDR89Q96FK6 387 aaPredicted RBP5.91□□□□□ -1.46
PSEN1-216ENST00000556066 ARL5BQ96KC2 179 aa5.91□□□□□ -1.46
PSEN1-216ENST00000556066 TEX37Q96LM6 180 aa5.91□□□□□ -1.46
PSEN1-216ENST00000556066 CCDC115Q96NT0 180 aa5.91□□□□□ -1.46
PSEN1-216ENST00000556066 LRRC37BQ96QE4 947 aa5.91□□□□□ -1.46
PSEN1-216ENST00000556066 OR52E6Q96RD3 313 aa5.91□□□□□ -1.46
PSEN1-216ENST00000556066 ZBTB18Q99592 522 aa5.91□□□□□ -1.46
PSEN1-216ENST00000556066 INPP5KQ9BT40 448 aa5.91□□□□□ -1.46
PSEN1-216ENST00000556066 CCDC106Q9BWC9 280 aa5.91□□□□□ -1.46
PSEN1-216ENST00000556066 WDR55Q9H6Y2 383 aaPredicted RBP5.91□□□□□ -1.46
PSEN1-216ENST00000556066 MEAF6Q9HAF1 191 aa5.91□□□□□ -1.46
PSEN1-216ENST00000556066 POLE3Q9NRF9 147 aa5.91□□□□□ -1.46
PSEN1-216ENST00000556066 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.91□□□□□ -1.46
PSEN1-216ENST00000556066 HAO1Q9UJM8 370 aa5.91□□□□□ -1.46
PSEN1-216ENST00000556066 LIPT1Q9Y234 373 aa5.91□□□□□ -1.46
PSEN1-216ENST00000556066 MAGED1Q9Y5V3 778 aaPredicted RBP5.91□□□□□ -1.46
PSEN1-216ENST00000556066 TMED7-TICAM2A0A0A6YYA0 188 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 A0A1W2PR80 420 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 PRAMEF27A3QJZ7 478 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 OR5H1A6NKK0 313 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 J3KRW8 73 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 SDHDO14521 159 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 AP3D1O14617 1153 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 GPR171O14626 319 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 ABCD4O14678 606 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 TMCC2O75069 709 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 NDUFS7O75251 213 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 SNNO75324 88 aaPredicted RBP5.9□□□□□ -1.46
PSEN1-216ENST00000556066 MRPL33O75394 65 aaKnown RBP5.9□□□□□ -1.46
PSEN1-216ENST00000556066 PMS2P2O95744 297 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 PGRP06401 933 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 CHRM4P08173 479 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 PAX1P15863 534 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 IL7RP16871 459 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 COX5AP20674 150 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 TACR3P29371 465 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 IDUAP35475 653 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 ACVR1BP36896 505 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 CDKN2CP42773 168 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 MAGEA8P43361 318 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 ZNF83P51522 516 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 POLR2HP52434 150 aaKnown RBP5.9□□□□□ -1.46
PSEN1-216ENST00000556066 CDH11P55287 796 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 ELF3P78545 371 aaPredicted RBP5.9□□□□□ -1.46
PSEN1-216ENST00000556066 GNA13Q14344 377 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 CLEC12BQ2HXU8 276 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 TIMM23BQ5SRD1 257 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 MRPL2Q5T653 305 aaKnown RBP5.9□□□□□ -1.46
PSEN1-216ENST00000556066 C9orf135Q5VTT2 229 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 FBXW9Q5XUX1 488 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 ABLIM2Q6H8Q1 611 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 SLC22A25Q6T423 547 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 CASP12Q6UXS9 341 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 ASRGL1Q7L266 308 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 SPATA19Q7Z5L4 167 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 ADGRG3Q86Y34 549 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 ZNF433Q8N7K0 673 aaPredicted RBP5.9□□□□□ -1.46
PSEN1-216ENST00000556066 FAM71CQ8NEG0 241 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 PIGXQ8TBF5 258 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 WDR60Q8WVS4 1066 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 GATAD2BQ8WXI9 593 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 DDIT4LQ96D03 193 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 HS6ST2Q96MM7 605 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 C7orf26Q96N11 449 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 TRNT1Q96Q11 434 aaKnown RBP5.9□□□□□ -1.46
PSEN1-216ENST00000556066 C1QTNF6Q9BXI9 259 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 TRIM2Q9C040 744 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 SLC38A1Q9H2H9 487 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 ARL8BQ9NVJ2 186 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 FAIMQ9NVQ4 179 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 AIG1Q9NVV5 245 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 ASB6Q9NWX5 421 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 CISD1Q9NZ45 108 aaKnown RBP5.9□□□□□ -1.46
PSEN1-216ENST00000556066 NPAP1Q9NZP6 1156 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 TMEM181Q9P2C4 612 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 BTNL2Q9UIR0 455 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 POU2F3Q9UKI9 436 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 TMED7Q9Y3B3 224 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 HDGFL3Q9Y3E1 203 aa5.9□□□□□ -1.46
PSEN1-216ENST00000556066 IGKV3D-15A0A087WSY6 115 aa5.89□□□□□ -1.47
PSEN1-216ENST00000556066 TMEM72A0PK05 275 aa5.89□□□□□ -1.47
PSEN1-216ENST00000556066 ZC3H12DA2A288 527 aaKnown RBP5.89□□□□□ -1.47
PSEN1-216ENST00000556066 CFAP73A6NFT4 308 aa5.89□□□□□ -1.47
PSEN1-216ENST00000556066 AGAP5A6NIR3 686 aa5.89□□□□□ -1.47
PSEN1-216ENST00000556066 TRIM64CA6NLI5 447 aa5.89□□□□□ -1.47
PSEN1-216ENST00000556066 TRPC5OSA6NMA1 111 aa5.89□□□□□ -1.47
PSEN1-216ENST00000556066 ZNF716A6NP11 495 aa5.89□□□□□ -1.47
PSEN1-216ENST00000556066 SHISA9B4DS77 424 aa5.89□□□□□ -1.47
PSEN1-216ENST00000556066 M0R1B8 84 aa5.89□□□□□ -1.47
PSEN1-216ENST00000556066 OVOL3O00110 214 aa5.89□□□□□ -1.47
PSEN1-216ENST00000556066 RFXANKO14593 260 aa5.89□□□□□ -1.47
PSEN1-216ENST00000556066 HDAC3O15379 428 aa5.89□□□□□ -1.47
PSEN1-216ENST00000556066 MGRN1O60291 552 aa5.89□□□□□ -1.47
PSEN1-216ENST00000556066 ANP32DO95626 131 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms