RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 SCN2BO60939 215 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 SNNO75324 88 aaPredicted RBP3.71□□□□□ -1.82
VTI1B-203ENST00000554636 TNFSF13O75888 250 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 RCBTB2O95199 551 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 ZWINTO95229 277 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 OXSR1O95747 527 aaPredicted RBP3.71□□□□□ -1.82
VTI1B-203ENST00000554636 HSPA4LO95757 839 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 ANGPTL1O95841 491 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 TGM6O95932 706 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 PLAUP00749 431 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 TUBBP07437 444 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 ALOX5P09917 674 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 MYZAPP0CAP1 466 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 NPIPA8P0DM63 369 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 ZNF17P17021 662 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 DDX5P17844 614 aaKnown RBP3.71□□□□□ -1.82
VTI1B-203ENST00000554636 PRPS1L1P21108 318 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 TBXA2RP21731 343 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 PSMA4P25789 261 aaKnown RBP3.71□□□□□ -1.82
VTI1B-203ENST00000554636 LCN1P31025 176 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 THBS4P35443 961 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 GCKP35557 465 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 RFX3P48380 749 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 SLC1A6P48664 564 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 SUCLG1P53597 346 aaKnown RBP3.71□□□□□ -1.82
VTI1B-203ENST00000554636 PSMD4P55036 377 aaKnown RBP3.71□□□□□ -1.82
VTI1B-203ENST00000554636 TPD52P55327 224 aaPredicted RBP3.71□□□□□ -1.82
VTI1B-203ENST00000554636 HBA1P69905 142 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 SORDQ00796 357 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 SRYQ05066 204 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 BST1Q10588 318 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 SNTB1Q13884 538 aaKnown RBP3.71□□□□□ -1.82
VTI1B-203ENST00000554636 RCAN2Q14206 197 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 SF3B4Q15427 424 aaKnown RBP eCLIP3.71□□□□□ -1.82
VTI1B-203ENST00000554636 GUSBP1Q15486 140 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 ZNHIT3Q15649 155 aaPredicted RBP3.71□□□□□ -1.82
VTI1B-203ENST00000554636 BCL2A1Q16548 175 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 SMU1Q2TAY7 513 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 PLPPR5Q32ZL2 321 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 GLYR1Q49A26 553 aaPredicted RBP3.71□□□□□ -1.82
VTI1B-203ENST00000554636 BEND6Q5SZJ8 279 aaPredicted RBP3.71□□□□□ -1.82
VTI1B-203ENST00000554636 CCNJQ5T5M9 372 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 CPTPQ5TA50 214 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 RAET1LQ5VY80 246 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 ZCCHC12Q6PEW1 402 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 ENPP6Q6UWR7 440 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 ARSKQ6UWY0 536 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 SZRD1Q7Z422 152 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 GALNT10Q86SR1 603 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 GRAMD2AQ8IUY3 354 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 CCDC28AQ8IWP9 274 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 CLECL1Q8IZS7 167 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 NATD1Q8N6N6 113 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 COX18Q8N8Q8 333 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 GATSQ8NAP1 163 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 OR4C3Q8NH37 302 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 SFXN5Q8TD22 340 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 GPR151Q8TDV0 419 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 DUSP19Q8WTR2 217 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 ABHD5Q8WTS1 349 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 FIG4Q92562 907 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 CDS1Q92903 461 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 TLCD1Q96CP7 247 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 TUBGCP3Q96CW5 907 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 PGM2Q96G03 612 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 ZNF845Q96IR2 970 aaPredicted RBP3.71□□□□□ -1.82
VTI1B-203ENST00000554636 PPP1R36Q96LQ0 422 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 ZFP3Q96NJ6 502 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 NPAS1Q99742 590 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 ZNF559Q9BR84 538 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 SFXN3Q9BWM7 321 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 NUF2Q9BZD4 464 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 TBL1XR1Q9BZK7 514 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 PIGUQ9H490 435 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 MEAF6Q9HAF1 191 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 TMBIM4Q9HC24 238 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 SDHAF3Q9NRP4 125 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 GIN1Q9NXP7 522 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 GAR1Q9NY12 217 aaKnown RBP3.71□□□□□ -1.82
VTI1B-203ENST00000554636 MED11Q9P086 117 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 ZNF629Q9UEG4 869 aaPredicted RBP3.71□□□□□ -1.82
VTI1B-203ENST00000554636 MRTO4Q9UKD2 239 aaKnown RBP3.71□□□□□ -1.82
VTI1B-203ENST00000554636 EIF3LQ9Y262 564 aaKnown RBP3.71□□□□□ -1.82
VTI1B-203ENST00000554636 RAP2CQ9Y3L5 183 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 KCNE3Q9Y6H6 103 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 CELSR1Q9NYQ6 3014 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 ZFHX3Q15911 3703 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 DNHD1Q96M86 4753 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 TACC2O95359 2948 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 HRNRQ86YZ3 2850 aaPredicted RBP3.7□□□□□ -1.82
VTI1B-203ENST00000554636 A0A087WZY1 265 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 RNF103-CHMP3A0A140T963 221 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 A0A1W2PNV4 684 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 TMEM120BA0PK00 339 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 SLC22A23A1A5C7 686 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 EEF1E1-BLOC1S5C9J1V9 151 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 SEC14L5O43304 696 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 EEF1E1O43324 174 aaKnown RBP3.7□□□□□ -1.82
VTI1B-203ENST00000554636 GMFGO60234 142 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 CTAG2O75638 210 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms