RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 BRCC3P46736 316 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 SERPINB8P50452 374 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 TPMTP51580 245 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 PRELPP51888 382 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 PLA2G16P53816 162 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 NDUFV3P56181 108 aaKnown RBP3.16□□□□□ -1.9
TDP1-207ENST00000553617 RIPK4P57078 832 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 EWSR1Q01844 656 aaKnown RBP eCLIP3.16□□□□□ -1.9
TDP1-207ENST00000553617 SCRN3Q0VDG4 424 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 EIF2B1Q14232 305 aaKnown RBP3.16□□□□□ -1.9
TDP1-207ENST00000553617 ELAVL3Q14576 367 aaKnown RBP3.16□□□□□ -1.9
TDP1-207ENST00000553617 ATXN7L3Q14CW9 347 aaPredicted RBP3.16□□□□□ -1.9
TDP1-207ENST00000553617 FASTKD3Q14CZ7 662 aaKnown RBP3.16□□□□□ -1.9
TDP1-207ENST00000553617 UBE2V2Q15819 145 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 TMEM44Q2T9K0 475 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 KLHL38Q2WGJ6 581 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 C18orf21Q32NC0 220 aaPredicted RBP3.16□□□□□ -1.9
TDP1-207ENST00000553617 TMEM52BQ4KMG9 183 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 SBK1Q52WX2 424 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 KLHL22Q53GT1 634 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 CEP85LQ5SZL2 805 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 LGSNQ5TDP6 509 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 SEL1L2Q5TEA6 688 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 STAC2Q6ZMT1 411 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 LRRC74BQ6ZQY2 392 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 CCDC121Q6ZUS5 278 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 LANCL3Q6ZV70 420 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 HSD11B1LQ7Z5J1 315 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 ABHD12BQ7Z5M8 362 aaPredicted RBP3.16□□□□□ -1.9
TDP1-207ENST00000553617 SLC13A5Q86YT5 568 aaPredicted RBP3.16□□□□□ -1.9
TDP1-207ENST00000553617 MCOLN2Q8IZK6 566 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 SYT14Q8NB59 555 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 CYB561A3Q8NBI2 242 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 TMEM104Q8NE00 496 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 FAM83FQ8NEG4 500 aaPredicted RBP3.16□□□□□ -1.9
TDP1-207ENST00000553617 OR2L3Q8NG85 312 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 OR51L1Q8NGJ5 315 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 DTD1Q8TEA8 209 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 PIGCQ92535 297 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 ESR2Q92731 530 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 MYLPFQ96A32 169 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 C18orf25Q96B23 403 aaPredicted RBP3.16□□□□□ -1.9
TDP1-207ENST00000553617 FBXO17Q96EF6 278 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 COQ2Q96H96 371 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 PPP1R16AQ96I34 528 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 GLT1D1Q96MS3 346 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 CYP2S1Q96SQ9 504 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 HSD17B14Q9BPX1 270 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 TMEM121Q9BTD3 319 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 NAT9Q9BTE0 207 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 MED10Q9BTT4 135 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 C20orf24Q9BUV8 137 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 OCR1Q9BZK8 76 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 C6orf62Q9GZU0 229 aaPredicted RBP3.16□□□□□ -1.9
TDP1-207ENST00000553617 OR2AG1Q9H205 316 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 SLC38A10Q9HBR0 1119 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 LYRM4Q9HD34 91 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 RAB18Q9NP72 206 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 PXMP2Q9NR77 195 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 SMOXQ9NWM0 555 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 RHBDL2Q9NX52 303 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 STOX2Q9P2F5 926 aaPredicted RBP3.16□□□□□ -1.9
TDP1-207ENST00000553617 RAB23Q9ULC3 237 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 POFUT2Q9Y2G5 429 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 WDR45Q9Y484 360 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 V9GYQ6 96 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 FHOD3Q2V2M9 1422 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 FRMPD3Q5JV73 1810 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 IGLV4-3A0A075B6K6 122 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 A0A1B0GVL5 298 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 A0A1B0GW15 77 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 A0A1W2PNV4 684 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 FUOMA2VDF0 154 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 FABP12A6NFH5 140 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 FAM74A7A6NL05 159 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 ERI2A8K979 691 aaKnown RBP3.15□□□□□ -1.91
TDP1-207ENST00000553617 LRRN3E7EW58 273 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 CASKO14936 926 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 STX7O15400 261 aaKnown RBP3.15□□□□□ -1.91
TDP1-207ENST00000553617 PPIHO43447 177 aaKnown RBP3.15□□□□□ -1.91
TDP1-207ENST00000553617 ATP8B1O43520 1251 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 TYROBPO43914 113 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 TIMM8AO60220 97 aaPredicted RBP3.15□□□□□ -1.91
TDP1-207ENST00000553617 IGHV3-9P01782 118 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 IGHG3P01860 377 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 SERPIND1P05546 499 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 WNT2P09544 360 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 CTXN2P0C2S0 81 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 OR4E1P0C645 316 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 TRIM49P0CI25 452 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 TRIM49CP0CI26 452 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 BCKDHAP12694 445 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 PGCP20142 388 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 PRPS1L1P21108 318 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 CNR1P21554 472 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 G0S2P27469 103 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 RPL4P36578 427 aaKnown RBP3.15□□□□□ -1.91
TDP1-207ENST00000553617 RAP1GDS1P52306 607 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 AP3S2P59780 193 aa3.15□□□□□ -1.91
TDP1-207ENST00000553617 KRTAP10-11P60412 298 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms