RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 SYNDIG1LA6NDD5 238 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 OR6C70A6NIJ9 312 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 SDHDO14521 159 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 HSPB6O14558 160 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 COPEO14579 308 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 ACOT8O14734 319 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 AZIN1O14977 448 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 SCAMP2O15127 329 aaKnown RBP4.33□□□□□ -1.72
SCAF11-214ENST00000550893 OR10H2O60403 315 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 CDC40O60508 579 aaKnown RBP eCLIP4.33□□□□□ -1.72
SCAF11-214ENST00000550893 HCN1O60741 890 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 SNNO75324 88 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-214ENST00000550893 TNFSF13O75888 250 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 NKX2-2O95096 273 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 CLDN14O95500 239 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 MLYCDO95822 493 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 TGM6O95932 706 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 KRT6AP02538 564 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 KRT6BP04259 564 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 TPOP07202 933 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 ANXA4P09525 319 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-214ENST00000550893 LINC00032P0C843 101 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 UROSP10746 265 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 LAMP1P11279 417 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 ZNF708P17019 499 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 CSNK2A2P19784 350 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-214ENST00000550893 IL11P20809 199 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 NT5EP21589 574 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 EDNRAP25101 427 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 PIK3R1P27986 724 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 HMOX2P30519 316 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 HPDP32754 393 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-214ENST00000550893 KRT6CP48668 564 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 RPS6KA3P51812 740 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 SUCLG1P53597 346 aaKnown RBP4.33□□□□□ -1.72
SCAF11-214ENST00000550893 MVDP53602 400 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 DIO3P55073 304 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 HNF4GQ14541 408 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 DUSP5Q16690 384 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 FBXL19-AS1Q494R0 122 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 CCDC153Q494R4 210 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 C6orf136Q5SQH8 315 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 BEND6Q5SZJ8 279 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-214ENST00000550893 SLC22A10Q63ZE4 541 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 TIGD3Q6B0B8 471 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 ARHGAP11AQ6P4F7 1023 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 EMBQ6PCB8 327 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 CAMKMTQ7Z624 323 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 GALNT10Q86SR1 603 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 YRDCQ86U90 279 aaKnown RBP4.33□□□□□ -1.72
SCAF11-214ENST00000550893 C10orf111Q8N326 155 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 RIBC1Q8N443 379 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-214ENST00000550893 OR2M3Q8NG83 312 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 OR7A2PQ8NGA2 310 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 LILRB4Q8NHJ6 448 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 FBXO30Q8TB52 745 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 SLC22A8Q8TCC7 542 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.33□□□□□ -1.72
SCAF11-214ENST00000550893 PIK3R3Q92569 461 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 EFHD2Q96C19 240 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-214ENST00000550893 ELP4Q96EB1 424 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 FAM120BQ96EK7 910 aaKnown RBP4.33□□□□□ -1.72
SCAF11-214ENST00000550893 C16orf58Q96GQ5 468 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 MAGED4Q96JG8 741 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 LURAP1Q96LR2 239 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 ZNF597Q96LX8 424 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 TSSK3Q96PN8 268 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 SECISBP2Q96T21 854 aaKnown RBP4.33□□□□□ -1.72
SCAF11-214ENST00000550893 TUBA1CQ9BQE3 449 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 C1orf50Q9BV19 199 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 IFT27Q9BW83 186 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 OSBPL11Q9BXB4 747 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 LIME1Q9H400 295 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 LRTM1Q9HBL6 345 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 THAP1Q9NVV9 213 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 QPCTLQ9NXS2 382 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 COPS7AQ9UBW8 275 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 DCDC2Q9UHG0 476 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 ATP6V1HQ9UI12 483 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 TAGLN3Q9UI15 199 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 DSCAMO60469 2012 aa4.33□□□□□ -1.72
SCAF11-214ENST00000550893 ARID1AO14497 2285 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 ALPK2Q86TB3 2170 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 TRGV5A0A0B4J1U4 118 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 NPIPA5A0A0B4J1W7 369 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 C17orf100A8MU93 164 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 C9JVG2 144 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 NPIPA7E9PJI5 369 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 KLRC4-KLRK1H3BQV0 150 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 ACOX3O15254 700 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 SLU7O95391 586 aaKnown RBP4.32□□□□□ -1.72
SCAF11-214ENST00000550893 CGAP01215 116 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 CSF1P09603 554 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 MYZAPP0CAP1 466 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 NPIPA8P0DM63 369 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 COX7A2P14406 83 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 ABOP16442 354 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 NAGAP17050 411 aa4.32□□□□□ -1.72
SCAF11-214ENST00000550893 TNNI3P19429 210 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms