RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 ARL5BQ96KC2 179 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 TBX5Q99593 518 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 TEAD3Q99594 435 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 P4HTMQ9NXG6 502 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 BAIAP2Q9UQB8 552 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 ERGIC3Q9Y282 383 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 GVINP1Q7Z2Y8 2422 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 FREM2Q5SZK8 3169 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 A0A0G2JMM0 328 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 A0A1W2PPB8 328 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 A0A1W2PRS3 328 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 KIR3DP1A8MWS1 328 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 H7C1C5 153 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 ARPC3O15145 178 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 AHCYL1O43865 530 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 NOL3O60936 208 aaKnown RBP11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 HPP00738 406 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 OPN1LWP04000 364 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 ZNF3P17036 446 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 GRPRP30550 384 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 HCCSP53701 268 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 DLX5P56178 289 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 CTXN1P60606 82 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 RPS3AP61247 264 aaKnown RBP11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 LCN6P62502 163 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 EIF3IQ13347 325 aaKnown RBP11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 ATP1A4Q13733 1029 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 ALG10Q5BKT4 473 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 MDGA2Q7Z553 956 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 GID4Q8IVV7 300 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 ZFP41Q8N8Y5 198 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 FADS6Q8N9I5 356 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 LSM14AQ8ND56 463 aaKnown RBP11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 GATAD2BQ8WXI9 593 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 ASB15Q8WXK1 588 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 RFKQ969G6 155 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 TSSK2Q96PF2 358 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 TSPAN32Q96QS1 320 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 SECISBP2Q96T21 854 aaKnown RBP11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 CENPOQ9BU64 300 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 MND1Q9BWT6 205 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 FKRPQ9H9S5 495 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 ASB6Q9NWX5 421 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 ZNF229Q9UJW7 825 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 YARS2Q9Y2Z4 477 aaKnown RBP11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 PMF1-BGLAPU3KQ54 211 aa11.09□□□□□ -0.63
AP003559.1-201ENST00000540906 PNMA8CA0A1B0GUJ8 204 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 A8MVM7 634 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 FAM171A2A8MVW0 826 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 FTCDNL1E5RQL4 147 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 C11orf98E9PRG8 122 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 ETV2O00321 342 aaPredicted RBP11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 MYL12BO14950 172 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 LRP3O75074 770 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 GPX5O75715 221 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 PLGP00747 810 aaPredicted RBP11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 TFP02787 698 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 CD14P08571 375 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 IMPDH2P12268 514 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 SHC1P29353 583 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 SSR4P51571 173 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 SLC16A1P53985 500 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 SUMO3P55854 103 aaPredicted RBP11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 RPS7P62081 194 aaKnown RBP11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 RPS15P62841 145 aaKnown RBP11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 SLC6A19Q695T7 634 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 NANOGNBQ7Z5D8 188 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 ARMC10Q8N2F6 343 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 SLC43A2Q8N370 569 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 ESX1Q8N693 406 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 EXD3Q8N9H8 876 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 ST8SIA1Q92185 356 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 PSMF1Q92530 271 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 ZMYND19Q96E35 227 aaPredicted RBP11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 UBL7Q96S82 380 aaPredicted RBP11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 CHCHD6Q9BRQ6 235 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 NMNAT2Q9BZQ4 307 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 CCDC86Q9H6F5 360 aaKnown RBP11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 ISG20L2Q9H9L3 353 aaKnown RBP11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 ADGRL4Q9HBW9 690 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 ERVK13-1Q9NX77 482 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 H2AFY2Q9P0M6 372 aaPredicted RBP11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 TNFRSF10DQ9UBN6 386 aa11.08□□□□□ -0.64
AP003559.1-201ENST00000540906 ALPK2Q86TB3 2170 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 LOC100506127A0A0U1RQW1 187 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 C12orf71A8MTZ7 269 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 DCTN6O00399 190 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 AIREO43918 545 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 SLC25A12O75746 678 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 F10P00742 488 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 SCG5P05408 212 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 PYCR1P32322 319 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 PRPS1P60891 318 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 CHAF1BQ13112 559 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 TGIF1Q15583 401 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 TMEM44Q2T9K0 475 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 MESTQ5EB52 335 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 TMEM164Q5U3C3 297 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 OPN5Q6U736 354 aa11.07□□□□□ -0.64
AP003559.1-201ENST00000540906 SSX6Q7RTT6 188 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms