RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 ADPRHL2Q9NX46 363 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 RCE1Q9Y256 329 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 NDUFAF1Q9Y375 327 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 PMF1-BGLAPU3KQ54 211 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 FREM1Q5H8C1 2179 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 TRAV36DV7A0A075B6V5 113 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 LOC102725191A0A1B0GVB3 256 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 ABCD4O14678 606 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 FMO6PO60774 539 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 SLC43A1O75387 559 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 IFNA14P01570 189 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 TP53P04637 393 aaPredicted RBP9.15□□□□□ -0.94
CDCA3-208ENST00000540683 ERCC1P07992 297 aaPredicted RBP9.15□□□□□ -0.94
CDCA3-208ENST00000540683 CSF3P09919 207 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 GKN3PP0CG01 181 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 IMPDH2P12268 514 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 C1DQ13901 141 aaKnown RBP9.15□□□□□ -0.94
CDCA3-208ENST00000540683 CYLC2Q14093 348 aaPredicted RBP9.15□□□□□ -0.94
CDCA3-208ENST00000540683 SCARB2Q14108 478 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 MAPRE2Q15555 327 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 GABRA6Q16445 453 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 CYP51A1Q16850 503 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 C3orf36Q3SXR2 165 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 ALG10BQ5I7T1 473 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 HMBOX1Q6NT76 420 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 C22orf34Q6ZV56 151 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 HMGN2P46Q86SG4 172 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 PATL1Q86TB9 770 aaKnown RBP9.15□□□□□ -0.94
CDCA3-208ENST00000540683 ATG4DQ86TL0 474 aaPredicted RBP9.15□□□□□ -0.94
CDCA3-208ENST00000540683 SERPINA11Q86U17 422 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 CCDC103Q8IW40 242 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 SCAIQ8N9R8 606 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 ADPRHL1Q8NDY3 354 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 OR52E4Q8NGH9 312 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 OR52N5Q8NH56 324 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 MAGEE2Q8TD90 523 aaPredicted RBP9.15□□□□□ -0.94
CDCA3-208ENST00000540683 CKAP2Q8WWK9 683 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 C3orf49Q96BT1 292 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 AURKBQ96GD4 344 aaPredicted RBP9.15□□□□□ -0.94
CDCA3-208ENST00000540683 ASPNQ9BXN1 380 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 LINC00470Q9BZP3 86 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 AMBRA1Q9C0C7 1298 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 SLC25A15Q9Y619 301 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 ACANP16112 2415 aa9.15□□□□□ -0.94
CDCA3-208ENST00000540683 ROS1P08922 2347 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 TMEM229AB2RXF0 380 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 H7C1Q1 480 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 OVOL3O00110 214 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 FRS3O43559 492 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 ADAM11O75078 769 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 BCAS1O75363 584 aaPredicted RBP9.14□□□□□ -0.95
CDCA3-208ENST00000540683 AKR7A3O95154 331 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 DANCRP0C864 163 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 CD40P25942 277 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 RGS8P57771 180 aaPredicted RBP9.14□□□□□ -0.95
CDCA3-208ENST00000540683 VEZF1Q14119 521 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 TSC22D1Q15714 1073 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 CLEC12BQ2HXU8 276 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 HSP90B2PQ58FF3 399 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 SEZ6L2Q6UXD5 910 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 DTX2Q86UW9 622 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 CLIP4Q8N3C7 705 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 GPR137CQ8N3F9 429 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 DPP10Q8N608 796 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 TMEM99Q8N816 258 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 FAM169BQ8N8A8 192 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 PIK3C3Q8NEB9 887 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 IL17RDQ8NFM7 739 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 NFKBIDQ8NI38 313 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 SLC26A7Q8TE54 656 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 IGFBPL1Q8WX77 278 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 ZNF524Q96C55 264 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 OXGR1Q96P68 337 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 SLCO1B3Q9NPD5 702 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 SLC17A5Q9NRA2 495 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 SLC7A10Q9NS82 523 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 SLC6A13Q9NSD5 602 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 CBLN4Q9NTU7 201 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 FBXL3Q9UKT7 428 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 AP3M1Q9Y2T2 418 aa9.14□□□□□ -0.95
CDCA3-208ENST00000540683 DPRXA6NFQ7 191 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 BBIP1A8MTZ0 92 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 M0R1B8 84 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 PDLIM1O00151 329 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 NPIPB7O75200 414 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 OR6A2O95222 327 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 MT-ATP6P00846 226 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 IGHV3-9P01782 118 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 CRYAAP02489 173 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 ITGA5P08648 1049 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 NQO1P15559 274 aaKnown RBP9.13□□□□□ -0.95
CDCA3-208ENST00000540683 IFNA8P32881 189 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 FABP6P51161 128 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 ZNF83P51522 516 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 IL1RL1Q01638 556 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 LTBQ06643 244 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 RAB35Q15286 201 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 MAPK11Q15759 364 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 MMEL1Q495T6 779 aa9.13□□□□□ -0.95
CDCA3-208ENST00000540683 COQ5Q5HYK3 327 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms