RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 FBXW9Q5XUX1 488 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 FAM91A1Q658Y4 838 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 ULK3Q6PHR2 472 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 PATL1Q86TB9 770 aaKnown RBP7.4□□□□□ -1.22
SPARC-208ENST00000538026 WDR31Q8NA23 367 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 VANGL1Q8TAA9 524 aaPredicted RBP7.4□□□□□ -1.22
SPARC-208ENST00000538026 PIGXQ8TBF5 258 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 TMEM45BQ96B21 275 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 PIK3IP1Q96FE7 263 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 SLC41A3Q96GZ6 507 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 MUS81Q96NY9 551 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 MCHR1Q99705 422 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 ECSITQ9BQ95 431 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 ZNF426Q9BUY5 554 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 SPATA5L1Q9BVQ7 753 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 FAM107BQ9H098 131 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 OR10A4Q9H209 315 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 CXXC4Q9H2H0 198 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 ADPRHL2Q9NX46 363 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 ITGB1BP2Q9UKP3 347 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 ANGPT4Q9Y264 503 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 NOSIPQ9Y314 301 aaKnown RBP7.4□□□□□ -1.22
SPARC-208ENST00000538026 SNX13Q9Y5W8 968 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 ELOA3DA6NLF2 546 aaPredicted RBP7.39□□□□□ -1.23
SPARC-208ENST00000538026 CPSF4LA6NMK7 179 aaKnown RBP7.39□□□□□ -1.23
SPARC-208ENST00000538026 FAM220BPB1ANY3 271 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 M0R082 166 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 CCDC22O60826 627 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 UPK3AO75631 287 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 CNOT4O95628 575 aaKnown RBP7.39□□□□□ -1.23
SPARC-208ENST00000538026 UQCRBP14927 111 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 KDELR2P33947 212 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 OR1E2P47887 323 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 GSK3BP49841 420 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 SELENOPP49908 381 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 SLC7A2P52569 658 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 GNGT1P63211 74 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 LIPEQ05469 1076 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 MAPRE2Q15555 327 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 GABRA6Q16445 453 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 ELOA3BQ3SY89 546 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 MMEL1Q495T6 779 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 CYBRD1Q53TN4 286 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 PHYHD1Q5SRE7 291 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 ZNF613Q6PF04 617 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 PAMR1Q6UXH9 720 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 HACD2Q6Y1H2 254 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 BHLHA15Q7RTS1 189 aaPredicted RBP7.39□□□□□ -1.23
SPARC-208ENST00000538026 VTCN1Q7Z7D3 282 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 STK32CQ86UX6 486 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 CARM1Q86X55 608 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 WFDC8Q8IUA0 241 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 NKAIN4Q8IVV8 208 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 SLC30A8Q8IWU4 369 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 ZNF100Q8IYN0 542 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 MICU2Q8IYU8 434 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 LRRC17Q8N6Y2 441 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 PCYOX1LQ8NBM8 494 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 STEAP2Q8NFT2 490 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 ELOA3Q8NG57 546 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 ZNF417Q8TAU3 575 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 ADAMTS16Q8TE57 1224 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 DNAJA4Q8WW22 397 aaPredicted RBP7.39□□□□□ -1.23
SPARC-208ENST00000538026 NEUROG1Q92886 237 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 SLC25A36Q96CQ1 311 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 ZNF837Q96EG3 531 aaPredicted RBP7.39□□□□□ -1.23
SPARC-208ENST00000538026 SLC47A1Q96FL8 570 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 PLPPR2Q96GM1 343 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 ZNF587Q96SQ5 575 aaPredicted RBP7.39□□□□□ -1.23
SPARC-208ENST00000538026 SH3GL1Q99961 368 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 TACO1Q9BSH4 297 aaKnown RBP7.39□□□□□ -1.23
SPARC-208ENST00000538026 NAA11Q9BSU3 229 aaPredicted RBP7.39□□□□□ -1.23
SPARC-208ENST00000538026 SF3B5Q9BWJ5 86 aaKnown RBP7.39□□□□□ -1.23
SPARC-208ENST00000538026 HDHD5Q9BXW7 423 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 AMBRA1Q9C0C7 1298 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 NELFAQ9H3P2 528 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 ARMC7Q9H6L4 198 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 MEPEQ9NQ76 525 aaPredicted RBP7.39□□□□□ -1.23
SPARC-208ENST00000538026 ARL8BQ9NVJ2 186 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 GID8Q9NWU2 228 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 ABCD2Q9UBJ2 740 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 MALT1Q9UDY8 824 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 TESQ9UGI8 421 aaKnown RBP7.39□□□□□ -1.23
SPARC-208ENST00000538026 C2CD3Q4AC94 2353 aa7.39□□□□□ -1.23
SPARC-208ENST00000538026 NAV3Q8IVL0 2385 aa7.38□□□□□ -1.23
SPARC-208ENST00000538026 TRAV36DV7A0A075B6V5 113 aa7.38□□□□□ -1.23
SPARC-208ENST00000538026 LOC102725191A0A1B0GVB3 256 aa7.38□□□□□ -1.23
SPARC-208ENST00000538026 A0A1W2PR80 420 aa7.38□□□□□ -1.23
SPARC-208ENST00000538026 ELOVL7A1L3X0 281 aa7.38□□□□□ -1.23
SPARC-208ENST00000538026 DYNC1I1O14576 645 aa7.38□□□□□ -1.23
SPARC-208ENST00000538026 GPR171O14626 319 aa7.38□□□□□ -1.23
SPARC-208ENST00000538026 FFAR1O14842 300 aa7.38□□□□□ -1.23
SPARC-208ENST00000538026 CASKO14936 926 aa7.38□□□□□ -1.23
SPARC-208ENST00000538026 TRAF3IP2O43734 574 aaPredicted RBP7.38□□□□□ -1.23
SPARC-208ENST00000538026 MRPL33O75394 65 aaKnown RBP7.38□□□□□ -1.23
SPARC-208ENST00000538026 GOSR1O95249 250 aa7.38□□□□□ -1.23
SPARC-208ENST00000538026 AHSA1O95433 338 aa7.38□□□□□ -1.23
SPARC-208ENST00000538026 PPP3CBP16298 524 aa7.38□□□□□ -1.23
SPARC-208ENST00000538026 PSME3P61289 254 aa7.38□□□□□ -1.23
SPARC-208ENST00000538026 FAPQ12884 760 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms