RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 RPS11P62280 158 aaKnown RBP eCLIP12.03□□□□□ -0.48
LDLR-203ENST00000535915 BTG1P62324 171 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 MRPL28Q13084 256 aaKnown RBP12.03□□□□□ -0.48
LDLR-203ENST00000535915 MAB21L1Q13394 359 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 HSD17B12Q53GQ0 312 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 BCL2L15Q5TBC7 163 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 TOMM5Q8N4H5 51 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 FAM160A2Q8N612 972 aaPredicted RBP12.03□□□□□ -0.48
LDLR-203ENST00000535915 OR51Q1Q8NH59 317 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 MOSPD2Q8NHP6 518 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 RLN3Q8WXF3 142 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 MRPL48Q96GC5 212 aaKnown RBP12.03□□□□□ -0.48
LDLR-203ENST00000535915 MAP6Q96JE9 813 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 NECTIN4Q96NY8 510 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 TMEM184BQ9Y519 407 aaPredicted RBP12.03□□□□□ -0.48
LDLR-203ENST00000535915 A0A1B0GVT2 93 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 FAM171A2A8MVW0 826 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 SMLR1H3BR10 107 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 ARPC3O15145 178 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 GATBO75879 557 aaKnown RBP12.02□□□□□ -0.48
LDLR-203ENST00000535915 BTCP35070 178 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 HTR2BP41595 481 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 GRK6P43250 576 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 CAPZBP47756 277 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 HSD17B7P56937 341 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 GPLD1P80108 840 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.02□□□□□ -0.48
LDLR-203ENST00000535915 SLC36A2Q495M3 483 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 KLHL26Q53HC5 615 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 SLC35D3Q5M8T2 416 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 HACD4Q5VWC8 232 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 LEG1Q6P5S2 330 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 ESPNLQ6ZVH7 1005 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 MED25Q71SY5 747 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 LIX1LQ8IVB5 337 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 SLITRK4Q8IW52 837 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 ZNF671Q8TAW3 534 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 ZFAND1Q8TCF1 268 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 SLC38A3Q99624 504 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 NUDT15Q9NV35 164 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 WSB2Q9NYS7 404 aaPredicted RBP12.02□□□□□ -0.48
LDLR-203ENST00000535915 KCNN3Q9UGI6 736 aa12.02□□□□□ -0.48
LDLR-203ENST00000535915 A0A0A6YYJ9 748 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 TEX13CA0A0J9YWL9 993 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 A0A1W2PQ72 361 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 C17orf105B2RV13 164 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 C2CD4DB7Z1M9 353 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 B8ZZF3 427 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 TPPPO94811 219 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 UBL3O95164 117 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 DHFRP00374 187 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 IGLV3-19P01714 112 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 M6PRP20645 277 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 RPS4XP62701 263 aaKnown RBP12.02□□□□□ -0.49
LDLR-203ENST00000535915 PITPNAQ00169 270 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 ZNF440Q8IYI8 595 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 ESX1Q8N693 406 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 SMRP1Q8NCR6 262 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 PHOSPHO1Q8TCT1 267 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 Q96M85 177 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 DDOQ99489 341 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 SLC19A3Q9BZV2 496 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 DPAGT1Q9H3H5 408 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 NIPAL2Q9H841 368 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 PRODH2Q9UF12 536 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 SEC16AO15027 2179 aa12.02□□□□□ -0.49
LDLR-203ENST00000535915 IGKV1D-42A0A075B6H8 117 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 SHISA7A6NL88 538 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 IDSB3KWA1 339 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 ZNF879B4DU55 563 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 ARHGEF9O43307 516 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 AQP2P41181 271 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 MMP15P51511 669 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 DGCR2P98153 550 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 CD226Q15762 336 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.01□□□□□ -0.49
LDLR-203ENST00000535915 WBP2NLQ6ICG8 309 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 OVCH1Q7RTY7 1134 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 YIPF5Q969M3 257 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 ORAI1Q96D31 301 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 OMA1Q96E52 524 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 TGM7Q96PF1 710 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 NMNAT2Q9BZQ4 307 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 PLCL2Q9UPR0 1127 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 SPEGQ15772 3267 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 C4orf47A7E2U8 309 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 TSPAN9O75954 239 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 GLCEO94923 617 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 OR3A3P47888 321 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 JAZF1Q86VZ6 243 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 DEFB119Q8N690 84 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 ZNF527Q8NB42 609 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 HSD17B8Q92506 261 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 ALG12Q9BV10 488 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 ZCCHC4Q9H5U6 513 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 NOX4Q9NPH5 578 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 NANSQ9NR45 359 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 UBQLN4Q9NRR5 601 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 SPATA2Q9UM82 520 aa12.01□□□□□ -0.49
LDLR-203ENST00000535915 OIP5O43482 229 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms