RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 PHF21AQ96BD5 680 aa14.55□□□□□ -0.08
ATP2C1-224ENST00000533801 LMF2Q9BU23 707 aaKnown RBP14.55□□□□□ -0.08
ATP2C1-224ENST00000533801 NEK6Q9HC98 313 aa14.55□□□□□ -0.08
ATP2C1-224ENST00000533801 IGHV1OR21-1A0A087WYE8 117 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 A0A1W2PR77 199 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 CSF2RBP32927 897 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 CDKN2AP42771 156 aaKnown RBP14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 SNTA1Q13424 505 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 AGAP6Q5VW22 663 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 RPL13AP3Q6NVV1 102 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 AGAP4Q96P64 663 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 RANGRFQ9HD47 186 aaPredicted RBP14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 EP300Q09472 2414 aaPredicted RBP14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 DCTN6O00399 190 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 IDH3BO43837 385 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 OR6A2O95222 327 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 PTHLHP12272 177 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 SPI1P17947 270 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 F8A1P23610 371 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 ETV6P41212 452 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 ZFP69Q49AA0 526 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 SFXN4Q6P4A7 337 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 DPY19L4Q7Z388 723 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 SLC25A45Q8N413 288 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 ZNF615Q8N8J6 731 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 ALG12Q9BV10 488 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 CLDN16Q9Y5I7 305 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 A0A087WUJ7 227 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 H3BML4 177 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 TSC22D2O75157 780 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 TFPIP10646 304 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 KIR2DL3P43628 341 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 MAP2K3P46734 347 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 FBXW4P57775 412 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 CFHR1Q03591 330 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 MELKQ14680 651 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 PHF19Q5T6S3 580 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 BICRALQ6AI39 1079 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 SLC29A4Q7RTT9 530 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 PLXDC1Q8IUK5 500 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 DNAAF1Q8NEP3 725 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 PELI1Q96FA3 418 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 ZNF649Q9BS31 505 aa14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 MRPS18AQ9NVS2 196 aaKnown RBP14.54□□□□□ -0.08
ATP2C1-224ENST00000533801 PRKAR1AP10644 381 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 SLC37A1P57057 533 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 SERTAD2Q14140 314 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 SF3B4Q15427 424 aaKnown RBP eCLIP14.53□□□□□ -0.088e-9■■■■□ 21.6
ATP2C1-224ENST00000533801 COL13A1Q5TAT6 717 aaPredicted RBP14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 HLA-CQ95604 372 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 LCORQ96JN0 433 aaPredicted RBP14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 DERL3Q96Q80 235 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 GMEB2Q9UKD1 530 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 ZNF337Q9Y3M9 751 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 LANCL1O43813 399 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 RAB3BP20337 219 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 EIF1AXP47813 144 aaKnown RBP14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 NXPH1P58417 271 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 ARIH2OSQ8N7S6 290 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 CCDC74AQ96AQ1 378 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 FRMD6Q96NE9 622 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 GALNT9Q9HCQ5 603 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 ADAM30Q9UKF2 790 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 UGT2A1Q9Y4X1 527 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 FREM3P0C091 2139 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 PRKCAP17252 672 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 POU3F3P20264 500 aaPredicted RBP14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 MAP3K8P41279 467 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 CXCL12P48061 93 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 ZNF117Q03924 483 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 FZD5Q13467 585 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 ATAD3CQ5T2N8 411 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 WBP2NLQ6ICG8 309 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 ZNF544Q6NX49 715 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 PM20D2Q8IYS1 436 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 ZNF485Q8NCK3 441 aa14.53□□□□□ -0.08
ATP2C1-224ENST00000533801 SOX1O00570 391 aaPredicted RBP14.52□□□□□ -0.08
ATP2C1-224ENST00000533801 FMO6PO60774 539 aa14.52□□□□□ -0.08
ATP2C1-224ENST00000533801 OR7A10O76100 309 aa14.52□□□□□ -0.08
ATP2C1-224ENST00000533801 MAS1P04201 325 aa14.52□□□□□ -0.08
ATP2C1-224ENST00000533801 AFF3P51826 1226 aaKnown RBP14.52□□□□□ -0.08
ATP2C1-224ENST00000533801 EFNA3P52797 238 aa14.52□□□□□ -0.08
ATP2C1-224ENST00000533801 RPL18Q07020 188 aaKnown RBP14.52□□□□□ -0.08
ATP2C1-224ENST00000533801 OR6C1Q96RD1 312 aa14.52□□□□□ -0.08
ATP2C1-224ENST00000533801 VN1R1Q9GZP7 353 aa14.52□□□□□ -0.08
ATP2C1-224ENST00000533801 RXFP3Q9NSD7 469 aa14.52□□□□□ -0.08
ATP2C1-224ENST00000533801 MYEF2Q9P2K5 600 aaKnown RBP14.52□□□□□ -0.08
ATP2C1-224ENST00000533801 EIF1AYO14602 144 aaKnown RBP14.52□□□□□ -0.09
ATP2C1-224ENST00000533801 XKRYO14609 159 aa14.52□□□□□ -0.09
ATP2C1-224ENST00000533801 PLA2G10O15496 165 aa14.52□□□□□ -0.09
ATP2C1-224ENST00000533801 LYRM1O43325 122 aa14.52□□□□□ -0.09
ATP2C1-224ENST00000533801 PSMD4P55036 377 aaKnown RBP14.52□□□□□ -0.09
ATP2C1-224ENST00000533801 FUT7Q11130 342 aa14.52□□□□□ -0.09
ATP2C1-224ENST00000533801 CDC20Q12834 499 aa14.52□□□□□ -0.09
ATP2C1-224ENST00000533801 ZSWIM7Q19AV6 140 aa14.52□□□□□ -0.09
ATP2C1-224ENST00000533801 GLYR1Q49A26 553 aaPredicted RBP14.52□□□□□ -0.09
ATP2C1-224ENST00000533801 NCCRP1Q6ZVX7 275 aaPredicted RBP14.52□□□□□ -0.09
ATP2C1-224ENST00000533801 OR5M1Q8NGP8 315 aa14.52□□□□□ -0.09
ATP2C1-224ENST00000533801 METTL21AQ8WXB1 218 aa14.52□□□□□ -0.09
ATP2C1-224ENST00000533801 OMA1Q96E52 524 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms