RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 ZNF440Q8IYI8 595 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 OR52P1PQ8NH57 321 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 BCL2L2Q92843 193 aaPredicted RBP16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 SOX7Q9BT81 388 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 KATNB1Q9BVA0 655 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 TMEM109Q9BVC6 243 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 OBP2BQ9NPH6 170 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 HAO1Q9UJM8 370 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 DSPPQ9NZW4 1301 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 TENM1Q9UKZ4 2725 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 LOC390937A0A1W2PQ73 354 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 A8MVM7 634 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 SDHDO14521 159 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 CECR9P0C854 216 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 THBS2P35442 1172 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 TXNL4AP83876 142 aaKnown RBP16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 NAAAQ02083 359 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 STX3Q13277 289 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 MPP2Q14168 576 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 LIN52Q52LA3 116 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 RPS26P11Q5JNZ5 115 aaPredicted RBP16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 C1orf140Q5VVS0 124 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 PRAMEF8Q5VWM4 474 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 PRAMEF7Q5VXH5 474 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 WBP2NLQ6ICG8 309 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 ANKRD16Q6P6B7 361 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 MYPOPQ86VE0 399 aaPredicted RBP16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 EPHX4Q8IUS5 362 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 LRRC34Q8IZ02 419 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 CLIP4Q8N3C7 705 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 BPESC1Q9GZL8 116 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 NELFAQ9H3P2 528 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 PIF1Q9H611 641 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 P2RX2Q9UBL9 471 aa16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 ZNF443Q9Y2A4 671 aaPredicted RBP16.01■□□□□ 0.15
SSSCA1-206ENST00000531405 B9A039 149 aa16■□□□□ 0.15
SSSCA1-206ENST00000531405 RGS16O15492 202 aaPredicted RBP16■□□□□ 0.15
SSSCA1-206ENST00000531405 TGFAP01135 160 aa16■□□□□ 0.15
SSSCA1-206ENST00000531405 BCHEP06276 602 aa16■□□□□ 0.15
SSSCA1-206ENST00000531405 CELA3BP08861 270 aa16■□□□□ 0.15
SSSCA1-206ENST00000531405 ETFAP13804 333 aa16■□□□□ 0.15
SSSCA1-206ENST00000531405 MVDP53602 400 aa16■□□□□ 0.15
SSSCA1-206ENST00000531405 COPZ1P61923 177 aa16■□□□□ 0.15
SSSCA1-206ENST00000531405 BST1Q10588 318 aa16■□□□□ 0.15
SSSCA1-206ENST00000531405 KDM8Q8N371 416 aa16■□□□□ 0.15
SSSCA1-206ENST00000531405 PLK3Q9H4B4 646 aa16■□□□□ 0.15
SSSCA1-206ENST00000531405 WDR55Q9H6Y2 383 aaPredicted RBP16■□□□□ 0.15
SSSCA1-206ENST00000531405 CRNNQ9UBG3 495 aaPredicted RBP16■□□□□ 0.15
SSSCA1-206ENST00000531405 CHST2Q9Y4C5 530 aa16■□□□□ 0.15
SSSCA1-206ENST00000531405 GPR45Q9Y5Y3 372 aa16■□□□□ 0.15
SSSCA1-206ENST00000531405 ARPC4-TTLL3A0A0A6YYG9 625 aa15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 LRP5LA4QPB2 252 aa15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 TMEM229AB2RXF0 380 aa15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 RFXANKO14593 260 aa15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 TM9SF1O15321 606 aa15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 SNUPNO95149 360 aaKnown RBP15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 KRT75O95678 551 aa15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 ZNF23P17027 643 aa15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 NCF2P19878 526 aaPredicted RBP15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 EPHA3P29320 983 aa15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 CRATP43155 626 aa15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 ROR2Q01974 943 aaKnown RBP15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 ATG16L1Q676U5 607 aa15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 SERPINA11Q86U17 422 aa15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 ZCCHC24Q8N2G6 241 aaKnown RBP15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 SLC38A5Q8WUX1 472 aa15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 SLC25A36Q96CQ1 311 aa15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 SSU72Q9NP77 194 aaKnown RBP15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 MYOZ1Q9NP98 299 aaPredicted RBP15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 SEC14L4Q9UDX3 406 aa15.99■□□□□ 0.15
SSSCA1-206ENST00000531405 HAX1O00165 279 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 NPIPB7O75200 414 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 PDE5AO76074 875 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 VAMP5O95183 116 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 IGLV1-44P01699 117 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 TFPTP0C1Z6 253 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 PNMTP11086 282 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 HNF1AP20823 631 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 IL2RGP31785 369 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 PPOXP50336 477 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 CLDN17P56750 224 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 HOXC5Q00444 222 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 HGFACQ04756 655 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 EFNB3Q15768 340 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 CR1LQ2VPA4 569 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 GTDC1Q4AE62 458 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 RNF220Q5VTB9 566 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 KIRREL3Q8IZU9 778 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 ZBTB18Q99592 522 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 PAIP2Q9BPZ3 127 aaKnown RBP15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 KCNK9Q9NPC2 374 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 RASD1Q9Y272 281 aa15.98■□□□□ 0.15
SSSCA1-206ENST00000531405 ZNF503-AS2A6NEH8 195 aa15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 FTCDNL1E5RQL4 147 aa15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 hCG_2039718K7EN88 272 aa15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 STAMBPO95630 424 aa15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 C8BP07358 591 aa15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 THBS4P35443 961 aa15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 RPS5P46782 204 aaKnown RBP15.97■□□□□ 0.15
SSSCA1-206ENST00000531405 IDH3GP51553 393 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms