RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 TOP3AQ13472 1001 aaPredicted RBP9.56□□□□□ -0.88
SOX6-213ENST00000530378 HBMQ6B0K9 141 aa9.56□□□□□ -0.88
SOX6-213ENST00000530378 ZNF620Q6ZNG0 422 aa9.56□□□□□ -0.88
SOX6-213ENST00000530378 TMPRSS11FQ6ZWK6 438 aa9.56□□□□□ -0.88
SOX6-213ENST00000530378 CCDC103Q8IW40 242 aa9.56□□□□□ -0.88
SOX6-213ENST00000530378 PACRGLQ8N7B6 248 aa9.56□□□□□ -0.88
SOX6-213ENST00000530378 TMEM99Q8N816 258 aa9.56□□□□□ -0.88
SOX6-213ENST00000530378 OR10D3Q8NH80 312 aa9.56□□□□□ -0.88
SOX6-213ENST00000530378 MARVELD3Q96A59 401 aa9.56□□□□□ -0.88
SOX6-213ENST00000530378 ZNF570Q96NI8 536 aa9.56□□□□□ -0.88
SOX6-213ENST00000530378 UCN2Q96RP3 112 aa9.56□□□□□ -0.88
SOX6-213ENST00000530378 OR52D1Q9H346 318 aa9.56□□□□□ -0.88
SOX6-213ENST00000530378 ACKR4Q9NPB9 350 aa9.56□□□□□ -0.88
SOX6-213ENST00000530378 ASF1BQ9NVP2 202 aa9.56□□□□□ -0.88
SOX6-213ENST00000530378 QPCTLQ9NXS2 382 aa9.56□□□□□ -0.88
SOX6-213ENST00000530378 MRPS18CQ9Y3D5 142 aaKnown RBP9.56□□□□□ -0.88
SOX6-213ENST00000530378 KDM4EB2RXH2 506 aaPredicted RBP9.55□□□□□ -0.88
SOX6-213ENST00000530378 MCIDASD6RGH6 385 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 F13BP05160 661 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 GNAO1P09471 354 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 ADORA3P0DMS8 318 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 ZNF708P17019 499 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 CHMP24386 653 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 RPL4P36578 427 aaKnown RBP9.55□□□□□ -0.88
SOX6-213ENST00000530378 RAD23AP54725 363 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 RPL18Q07020 188 aaKnown RBP9.55□□□□□ -0.88
SOX6-213ENST00000530378 KLRB1Q12918 225 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 PMS2P3Q13401 168 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 FHL1Q13642 323 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 VASNQ6EMK4 673 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 SMARCD3Q6STE5 483 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 MAMDC2Q7Z304 686 aaPredicted RBP9.55□□□□□ -0.88
SOX6-213ENST00000530378 GPAT4Q86UL3 456 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 GHDCQ8N2G8 530 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 OR2V1Q8NHB1 315 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 MIB2Q96AX9 1013 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 SNRNP40Q96DI7 357 aaKnown RBP9.55□□□□□ -0.88
SOX6-213ENST00000530378 ZNF184Q99676 751 aaPredicted RBP9.55□□□□□ -0.88
SOX6-213ENST00000530378 ADI1Q9BV57 179 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 FKRPQ9H9S5 495 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 ADAM18Q9Y3Q7 739 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 AP4B1Q9Y6B7 739 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 CDH10Q9Y6N8 788 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 SHANK1Q9Y566 2161 aa9.55□□□□□ -0.88
SOX6-213ENST00000530378 MED12LQ86YW9 2145 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 GJE1A6NN92 205 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 TTLL8A6PVC2 850 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 ERVH48-1M5A8F1 160 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 RNF13O43567 381 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 PPP1R3DO95685 299 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 IGHG3P01860 377 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 CRYABP02511 175 aaKnown RBP9.54□□□□□ -0.88
SOX6-213ENST00000530378 HIST1H2ABP04908 130 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 ASAH2BP0C7U1 165 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 OSMP13725 252 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 GSTM3P21266 225 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 ENPP1P22413 925 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 NFATC3Q12968 1075 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 NPRL3Q12980 569 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 INAQ16352 499 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 SGCBQ16585 318 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 ZBED5Q49AG3 693 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 TMPPEQ6ZT21 453 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 RASSF6Q6ZTQ3 369 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 HIST3H2AQ7L7L0 130 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 MFSD8Q8NHS3 518 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 TEX47Q8TBZ9 253 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 ROBO4Q8WZ75 1007 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 OSTF1Q92882 214 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 HIST1H2ACQ93077 130 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 TIMP4Q99727 224 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 IFT27Q9BW83 186 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 TSSK6Q9BXA6 273 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 ASPNQ9BXN1 380 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 POTEKPQ9BYX7 375 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 AASSQ9UDR5 926 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 ZNF229Q9UJW7 825 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 SIGLEC7Q9Y286 467 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 HDGFL3Q9Y3E1 203 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 OR2T1O43869 369 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 HCN1O60741 890 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 OR6A2O95222 327 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 MT-ATP6P00846 226 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 HLA-DOBP13765 273 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 CDH2P19022 906 aaPredicted RBP9.54□□□□□ -0.88
SOX6-213ENST00000530378 CRISP1P54107 249 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 CARD18P57730 90 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 ERVK-25P63136 954 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 PTGES3Q15185 160 aaKnown RBP9.54□□□□□ -0.88
SOX6-213ENST00000530378 SLC35F1Q5T1Q4 408 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 RPUSD3Q6P087 351 aaKnown RBP9.54□□□□□ -0.88
SOX6-213ENST00000530378 C5orf46Q6UWT4 87 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 ESPNLQ6ZVH7 1005 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 FGD2Q7Z6J4 655 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 MEIOBQ8N635 442 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 OR52L1Q8NGH7 329 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 OR4Q3Q8NH05 313 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 OR5J2Q8NH18 312 aa9.54□□□□□ -0.88
SOX6-213ENST00000530378 ZNF775Q96BV0 537 aaPredicted RBP9.54□□□□□ -0.88
SOX6-213ENST00000530378 WDYHV1Q96HA8 205 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms