RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 MBD6Q96DN6 1003 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 PERPQ96FX8 193 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 CCL19Q99731 98 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 ELAC2Q9BQ52 826 aaKnown RBP10.12□□□□□ -0.79
VCAN-212ENST00000515397 ECSITQ9BQ95 431 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 CXXC4Q9H2H0 198 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 KLHL14Q9P2G3 628 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 EDARQ9UNE0 448 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 CAPN7Q9Y6W3 813 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 DSCAMO60469 2012 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 ZFHX3Q15911 3703 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 OR5H1A6NKK0 313 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 FTCDNL1E5RQL4 147 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 M0R082 166 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 AIM2O14862 343 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 UPK3AO75631 287 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 COX5AP20674 150 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 CD247P20963 164 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 GRPRP30550 384 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 PCGF2P35227 344 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 CLDN17P56750 224 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 NCALDP61601 193 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 GABRA6Q16445 453 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 NRF1Q16656 503 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 NCMAPQ5T1S8 102 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 ADAM5Q6NVV9 412 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 NIPAL3Q6P499 406 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 ULK3Q6PHR2 472 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 CREB3L2Q70SY1 520 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 LINGO2Q7L985 606 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 CALHM3Q86XJ0 350 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 TREML1Q86YW5 311 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 C10orf53Q8N6V4 93 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 LSMEM1Q8N8F7 131 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 WDR31Q8NA23 367 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 KBTBD8Q8NFY9 601 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 MFSD8Q8NHS3 518 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 ZNF417Q8TAU3 575 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 SLC26A7Q8TE54 656 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 SLC38A4Q969I6 547 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 MUCL1Q96DR8 90 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 SLC47A1Q96FL8 570 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 ZNF583Q96ND8 569 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 ALPK1Q96QP1 1244 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 ZNF587Q96SQ5 575 aaPredicted RBP10.11□□□□□ -0.79
VCAN-212ENST00000515397 ARHGDIGQ99819 225 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 OR10A4Q9H209 315 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 PARPBPQ9NWS1 579 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 SELENONQ9NZV5 590 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 SLC9A8Q9Y2E8 581 aa10.11□□□□□ -0.79
VCAN-212ENST00000515397 A0A087WUJ7 227 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 A0A0B4J2E0 115 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 A0A1B0GX12 115 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 KPNA4O00629 521 aaPredicted RBP10.1□□□□□ -0.79
VCAN-212ENST00000515397 SERPINI2O75830 405 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 KRT33AO76009 404 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 HPRP00739 348 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 CD3EP07766 207 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 HLA-DOBP13765 273 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 CD99P14209 185 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 GTF2E2P29084 291 aaKnown RBP10.1□□□□□ -0.79
VCAN-212ENST00000515397 NR1H2P55055 460 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 TUBA1BP68363 451 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 TUBA4AP68366 448 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 NKX6-1P78426 367 aaPredicted RBP10.1□□□□□ -0.79
VCAN-212ENST00000515397 SLC25A3Q00325 362 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 SPOCK1Q08629 439 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 HIKESHIQ53FT3 197 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 ENTPD8Q5MY95 495 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 CARD17Q5XLA6 110 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 WDR88Q6ZMY6 472 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 TUBA1AQ71U36 451 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 PATL1Q86TB9 770 aaKnown RBP10.1□□□□□ -0.79
VCAN-212ENST00000515397 RANBP3LQ86VV4 465 aaPredicted RBP10.1□□□□□ -0.79
VCAN-212ENST00000515397 TGIF2LYQ8IUE0 185 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 KRTAP1-3Q8IUG1 177 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 WDFY1Q8IWB7 410 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 DNAJA4Q8WW22 397 aaPredicted RBP10.1□□□□□ -0.79
VCAN-212ENST00000515397 SLC35B4Q969S0 331 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 TXNDC15Q96J42 360 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 MOGAT1Q96PD6 335 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 TMEM204Q9BSN7 226 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 EMC6Q9BV81 110 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 SF3B5Q9BWJ5 86 aaKnown RBP10.1□□□□□ -0.79
VCAN-212ENST00000515397 GSX1Q9H4S2 264 aaPredicted RBP10.1□□□□□ -0.79
VCAN-212ENST00000515397 CMTM6Q9NX76 183 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 TAS2R16Q9NYV7 291 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 MALT1Q9UDY8 824 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 TESQ9UGI8 421 aaKnown RBP10.1□□□□□ -0.79
VCAN-212ENST00000515397 LAMP3Q9UQV4 416 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 RASD1Q9Y272 281 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 SH3GLB1Q9Y371 365 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 RNF115Q9Y4L5 304 aa10.1□□□□□ -0.79
VCAN-212ENST00000515397 TRAV36DV7A0A075B6V5 113 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 A0A096LPE4 126 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 A0A1W2PPZ6 126 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 MS4A18H0YCH9 400 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 M0R1B8 84 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 PDLIM1O00151 329 aa10.09□□□□□ -0.79
VCAN-212ENST00000515397 HS3ST1O14792 307 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms