RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 CPPED1Q9BRF8 314 aaPredicted RBP5.17□□□□□ -1.58
RNF4-217ENST00000511892 ACTR6Q9GZN1 396 aa5.17□□□□□ -1.58
RNF4-217ENST00000511892 PAIP1Q9H074 479 aaKnown RBP5.17□□□□□ -1.58
RNF4-217ENST00000511892 PCDHAC1Q9H158 963 aa5.17□□□□□ -1.58
RNF4-217ENST00000511892 SLC38A1Q9H2H9 487 aa5.17□□□□□ -1.58
RNF4-217ENST00000511892 RAD21L1Q9H4I0 556 aa5.17□□□□□ -1.58
RNF4-217ENST00000511892 MAGIXQ9H6Y5 334 aa5.17□□□□□ -1.58
RNF4-217ENST00000511892 BCO1Q9HAY6 547 aa5.17□□□□□ -1.58
RNF4-217ENST00000511892 GP6Q9HCN6 339 aa5.17□□□□□ -1.58
RNF4-217ENST00000511892 TIGARQ9NQ88 270 aa5.17□□□□□ -1.58
RNF4-217ENST00000511892 BEX4Q9NWD9 120 aaPredicted RBP5.17□□□□□ -1.58
RNF4-217ENST00000511892 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.17□□□□□ -1.58
RNF4-217ENST00000511892 GDF2Q9UK05 429 aaPredicted RBP5.17□□□□□ -1.58
RNF4-217ENST00000511892 RAB26Q9ULW5 256 aa5.17□□□□□ -1.58
RNF4-217ENST00000511892 SLC35A3Q9Y2D2 325 aa5.17□□□□□ -1.58
RNF4-217ENST00000511892 GPR52Q9Y2T5 361 aa5.17□□□□□ -1.58
RNF4-217ENST00000511892 WDR45Q9Y484 360 aa5.17□□□□□ -1.58
RNF4-217ENST00000511892 FN1P02751 2386 aaKnown RBP5.17□□□□□ -1.58
RNF4-217ENST00000511892 ABCA2Q9BZC7 2435 aa5.17□□□□□ -1.58
RNF4-217ENST00000511892 ARFGEF3Q5TH69 2177 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 KRTAP9-6A0A140TA67 174 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 TCRBV5S2A0A599 114 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 MAGEA13PA6NCF6 341 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 AGAP5A6NIR3 686 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 GSTA4O15217 222 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 DENRO43583 198 aaKnown RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 CYTIPO60759 359 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 DEAF1O75398 565 aaPredicted RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 ADAP00813 363 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 FESP07332 822 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 YES1P07947 543 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 UQCRBP14927 111 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 PPP3CBP16298 524 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 HOXB4P17483 251 aaPredicted RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 GPX2P18283 190 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 PGCP20142 388 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 PSMB1P20618 241 aaKnown RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 PEX2P28328 305 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 NTF4P34130 210 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 RYKP34925 604 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 APOBEC1P41238 236 aaKnown RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 DIO1P49895 249 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 GTF2A1P52655 376 aaPredicted RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 TXNL4AP83876 142 aaKnown RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 CHRNB3Q05901 458 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 RBBP4Q09028 425 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 RASGEF1BQ0VAM2 473 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 MED21Q13503 144 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 VEZF1Q14119 521 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 ACKR1Q16570 336 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 CYP51A1Q16850 503 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 GTDC1Q4AE62 458 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 FAM98BQ52LJ0 330 aaKnown RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 SYT14P1Q58G82 188 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 BEX5Q5H9J7 111 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 TMEM201Q5SNT2 666 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 SFRP5Q5T4F7 317 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 ABLIM2Q6H8Q1 611 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 C3orf33Q6P1S2 294 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 SEZ6L2Q6UXD5 910 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 TMPPEQ6ZT21 453 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 ATG4DQ86TL0 474 aaPredicted RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 STK32CQ86UX6 486 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 CALHM3Q86XJ0 350 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 WFDC8Q8IUA0 241 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 SLC30A8Q8IWU4 369 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 MICU2Q8IYU8 434 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 SLC43A2Q8N370 569 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 TRIML2Q8N7C3 387 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 FAM156AQ8NDB6 213 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 CANT1Q8WVQ1 401 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 TMEM234Q8WY98 164 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 CNOT9Q92600 299 aaKnown RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 EME1Q96AY2 570 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 S100PBPQ96BU1 408 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 DNAJA3Q96EY1 480 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 PLPPR2Q96GM1 343 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 CENPNQ96H22 339 aaPredicted RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 REXO5Q96IC2 774 aaKnown RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 ARL5BQ96KC2 179 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 ZNF583Q96ND8 569 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 TRNT1Q96Q11 434 aaKnown RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 OR5B2Q96R09 309 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 ZNF300Q96RE9 604 aaPredicted RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 PIP5K1AQ99755 562 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 PKP2Q99959 881 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 TMEM204Q9BSN7 226 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 BDH2Q9BUT1 245 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 C9orf16Q9BUW7 83 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 RSPO3Q9BXY4 272 aaPredicted RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 KRTAP9-2Q9BYQ4 174 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 OR10A4Q9H209 315 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 GSX1Q9H4S2 264 aaPredicted RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 KAT8Q9H7Z6 458 aaKnown RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 UBTD1Q9HAC8 227 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 EXOSC3Q9NQT5 275 aaKnown RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 CTPS2Q9NRF8 586 aa5.16□□□□□ -1.58
RNF4-217ENST00000511892 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.16□□□□□ -1.58
RNF4-217ENST00000511892 VAPAQ9P0L0 249 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms