RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 CSNK2A1P68400 391 aaPredicted RBP13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 SIRPAP78324 504 aa13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 LSM11P83369 360 aaKnown RBP eCLIP13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 CHRNB3Q05901 458 aa13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 CCNIQ14094 377 aa13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 TRAM2Q15035 370 aa13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 FAM98BQ52LJ0 330 aaKnown RBP13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 TTC33Q6PID6 262 aaPredicted RBP13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 PFN4Q8NHR9 129 aa13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 RNF128Q8TEB7 428 aa13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 CANT1Q8WVQ1 401 aa13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 NRGNQ92686 78 aa13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 SFXN3Q9BWM7 321 aa13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 PRRG4Q9BZD6 226 aa13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 RNF122Q9H9V4 155 aa13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 NMNAT1Q9HAN9 279 aaPredicted RBP13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 KCNN3Q9UGI6 736 aa13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 MCTS1Q9ULC4 181 aaKnown RBP13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 AURKCQ9UQB9 309 aa13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 TRAPPC4Q9Y296 219 aa13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 FAM32AQ9Y421 112 aaKnown RBP13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 TESMINQ9Y4I5 508 aa13.85□□□□□ -0.19
SH3TC1-220ENST00000511002 AKAP6Q13023 2319 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 RAMP1O60894 148 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 BGLAPP02818 100 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 GPIP06744 558 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 H1F0P07305 194 aaKnown RBP13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 FCGR2AP12318 317 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 ITGA2P17301 1181 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 CBLP22681 906 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 IFNA8P32881 189 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 RBM34P42696 430 aaKnown RBP13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 KIR2DL2P43627 348 aaPredicted RBP13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 SLC35A1P78382 337 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 SPIBQ01892 262 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 C5orf46Q6UWT4 87 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 FCRLAQ7L513 359 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 PIWIL3Q7Z3Z3 882 aaKnown RBP13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 BTLAQ7Z6A9 289 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 LINC01560Q8TB33 94 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 ABHD3Q8WU67 409 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 TMEM239Q8WW34 195 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 SLCO4A1Q96BD0 722 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 SLC25A36Q96CQ1 311 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 RSRC1Q96IZ7 334 aaKnown RBP13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 DHRS1Q96LJ7 313 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 ZFP3Q96NJ6 502 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 MOGAT1Q96PD6 335 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 EPYCQ99645 322 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 TAPBPLQ9BX59 468 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 MEPEQ9NQ76 525 aaPredicted RBP13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 GALNT8Q9NY28 637 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 SEC14L4Q9UDX3 406 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 CLEC4AQ9UMR7 237 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 LRBAP50851 2863 aa13.84□□□□□ -0.19
SH3TC1-220ENST00000511002 ANKHD1Q8IWZ3 2542 aaKnown RBP13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 TRBV4-1A0A0J9YWV2 114 aa13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 ENO4A6NNW6 628 aa13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 DNPH1O43598 174 aa13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 AKR7A3O95154 331 aa13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 RAP2AP10114 183 aa13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 RRM2P31350 389 aa13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 KIR2DL3P43628 341 aa13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 LTBQ06643 244 aa13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 GUSBP1Q15486 140 aa13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 FGD3Q5JSP0 725 aa13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 FAM69AQ5T7M9 428 aa13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 ABLIM2Q6H8Q1 611 aa13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 MEX3DQ86XN8 651 aaKnown RBP13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 C10orf53Q8N6V4 93 aa13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 CNEP1R1Q8N9A8 125 aa13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 MFSD8Q8NHS3 518 aa13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 POP5Q969H6 163 aaKnown RBP13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 STARD4Q96DR4 205 aa13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 ZHX1-C8orf76Q96EF9 292 aa13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 RBM24Q9BX46 236 aaKnown RBP13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 SLC19A3Q9BZV2 496 aa13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 C20orf141Q9NUB4 165 aa13.83□□□□□ -0.2
SH3TC1-220ENST00000511002 SPG11Q96JI7 2443 aa13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 A0A087WUU8 490 aa13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 A0A1W2PRQ8 180 aa13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 ERICH4A6NGS2 130 aa13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 A8MXE2 369 aa13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 CYTIPO60759 359 aa13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 FZD7O75084 574 aa13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 SMNDC1O75940 238 aaKnown RBP eCLIP13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 UMPSP11172 480 aa13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 NQO1P15559 274 aaKnown RBP13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 GRPRP30550 384 aa13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 H3F3AP84243 136 aa13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 DGCR6Q14129 220 aa13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 KPNB1Q14974 876 aaKnown RBP13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 SEC23BQ15437 767 aa13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 ZNF74Q16587 644 aa13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 OTUD3Q5T2D3 398 aaPredicted RBP13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 PODNL1Q6PEZ8 512 aa13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 TBPL2Q6SJ96 375 aa13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 PAQR6Q6TCH4 344 aa13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 TMEM200AQ86VY9 491 aa13.82□□□□□ -0.2
SH3TC1-220ENST00000511002 CCDC103Q8IW40 242 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms