RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 ACTR3BQ9P1U1 418 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 TESQ9UGI8 421 aaKnown RBP4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 KCNE5Q9UJ90 142 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 ICAM5Q9UMF0 924 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 SAMD4AQ9UPU9 718 aaKnown RBP4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZNF443Q9Y2A4 671 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 SLC9A8Q9Y2E8 581 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 C15orf41Q9Y2V0 281 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 CSAG2Q9Y5P2 127 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 KALRNO60229 2985 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 MPDZO75970 2070 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 SMG1Q96Q15 3661 aaKnown RBP4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 A0A1B0GVC2 190 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 CFAP73A6NFT4 308 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 LRRC3CA6NJW4 275 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 AQP12BA6NM10 295 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 EIF4E1BA6NMX2 242 aaKnown RBP4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 ADAM10O14672 748 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 TFECO14948 347 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 SUV39H1O43463 412 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 HCRTR2O43614 444 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 GCM2O75603 506 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 ACTL6AO96019 429 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 FESP07332 822 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 LINGO3P0C6S8 592 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 UMPSP11172 480 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZNF17P17021 662 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 ITGA2P17301 1181 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 CHMP24386 653 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 DPP4P27487 766 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 GDF1P27539 372 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 ELK4P28324 431 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 DNASE1L1P49184 302 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZNF41P51814 821 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 PIGFQ07326 219 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 EPS8Q12929 822 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 SKP2Q13309 424 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 CEACAM7Q14002 265 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 SF3B4Q15427 424 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 INPP5JQ15735 1006 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 CD226Q15762 336 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 MAPK14Q16539 360 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 SLC25A53Q5H9E4 307 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 NHSL2Q5HYW2 709 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 MRPL2Q5T653 305 aaKnown RBP4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZNF324BQ6AW86 544 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 LCN8Q6JVE9 175 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 ARHGAP11AQ6P4F7 1023 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 AAGABQ6PD74 315 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 C5orf46Q6UWT4 87 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZNF836Q6ZNA1 936 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 ASRGL1Q7L266 308 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 GALNT10Q86SR1 603 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 RANBP3LQ86VV4 465 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 DHFR2Q86XF0 187 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 AQP12AQ8IXF9 295 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 GHDCQ8N2G8 530 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 TMEM251Q8N6I4 163 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 LSMEM1Q8N8F7 131 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 WDSUB1Q8N9V3 476 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 GPR119Q8TDV5 335 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 DNAJA4Q8WW22 397 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 NEU4Q8WWR8 484 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 FIG4Q92562 907 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 TAMM41Q96BW9 452 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 SARAFQ96BY9 339 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZG16BQ96DA0 208 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 NSMCE2Q96MF7 247 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 JSRP1Q96MG2 331 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 RAB3IPQ96QF0 476 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 ARPC5LQ9BPX5 153 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 PIGQQ9BRB3 760 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 CADM1Q9BY67 442 aaKnown RBP4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 HES7Q9BYE0 225 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 KRTAP9-8Q9BYQ0 159 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 TRIM2Q9C040 744 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 OR2B2Q9GZK3 357 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 PCDHAC1Q9H158 963 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 DSN1Q9H410 356 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 C12orf10Q9HB07 376 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 GALNT9Q9HCQ5 603 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 AKIP1Q9NQ31 210 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 ACER3Q9NUN7 267 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 DCAF13Q9NV06 445 aaKnown RBP4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 PAQR5Q9NXK6 330 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 FLRT3Q9NZU0 649 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 DKKL1Q9UK85 242 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 CARD8Q9Y2G2 431 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 SPIN1Q9Y657 262 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 SHANK1Q9Y566 2161 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 CFAP46Q8IYW2 2715 aa4.95□□□□□ -1.62
HMGB1P44-201ENST00000508597 MED12Q93074 2177 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 TRGV5A0A0B4J1U4 118 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 NPIPA5A0A0B4J1W7 369 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 A0A0G2JMM0 328 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 A0A1W2PPB8 328 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 A0A1W2PRS3 328 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 HTR3EA5X5Y0 456 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 PINLYPA6NC86 204 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms