RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 CDHR4A6H8M9 788 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 IGHV2-5P01817 119 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 ZGLP1P0C6A0 271 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 SLC25A4P12235 298 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 EIF2S3P41091 472 aaKnown RBP16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 TAS2R38P59533 333 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 DEFA6Q01524 100 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 RPE65Q16518 533 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 FAM76BQ5HYJ3 339 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 LY6G6FQ5SQ64 297 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 TMEM69Q5SWH9 247 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 KRT77Q7Z794 578 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 HMGN2P46Q86SG4 172 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 OR5J2Q8NH18 312 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 C1orf216Q8TAB5 229 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 SLC2A12Q8TD20 617 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 C15orf40Q8WUR7 153 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 GAL3ST1Q99999 423 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 SMCO4Q9NRQ5 59 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 UQCC1Q9NVA1 299 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 ANKRD10Q9NXR5 420 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 CALML5Q9NZT1 146 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 IL20RAQ9UHF4 553 aa16.41■□□□□ 0.22
POLR2J3-209ENST00000504157 TSPAN11A1L157 253 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 BHLHE40O14503 412 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 GPR37O15354 613 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 ABLIM3O94929 683 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 THY1P04216 161 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 CD1AP06126 327 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 RAB40ALP0C0E4 278 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 CD79AP11912 226 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 PPT1P50897 306 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 C9orf152Q5JTZ5 239 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 ZCCHC12Q6PEW1 402 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 GDF7Q7Z4P5 450 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 DCUN1D3Q8IWE4 304 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 ARL14EPQ8N8R7 260 aaPredicted RBP16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 ZNF565Q8N9K5 539 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 TCTEX1D2Q8WW35 142 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 RAB40AQ8WXH6 277 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 SLC41A3Q96GZ6 507 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 CCDC86Q9H6F5 360 aaKnown RBP16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 MED20Q9H944 212 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 KLHL28Q9NXS3 571 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 SLC25A13Q9UJS0 675 aa16.4■□□□□ 0.22
POLR2J3-209ENST00000504157 IFITM5A6NNB3 132 aa16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 CDC42EP2O14613 210 aa16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 OGG1O15527 345 aa16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 LILRB5O75023 590 aa16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 RCC1P18754 421 aaPredicted RBP16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 PYCR1P32322 319 aa16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 STXBP1P61764 594 aaKnown RBP16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 ACTC1P68032 377 aa16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 ACTA1P68133 377 aa16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 ZNF85Q03923 595 aa16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 FCRLAQ7L513 359 aa16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 BEST3Q8N1M1 668 aa16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 LNX2Q8N448 690 aa16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 OR56A1Q8NGH5 318 aa16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 LRIG1Q96JA1 1093 aa16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 SMAD5Q99717 465 aaKnown RBP16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 AIF1LQ9BQI0 150 aa16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 TMPRSS5Q9H3S3 457 aa16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 POLE3Q9NRF9 147 aa16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 TMEM100Q9NV29 134 aa16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 HCSTQ9UBK5 93 aa16.39■□□□□ 0.22
POLR2J3-209ENST00000504157 MYO10Q9HD67 2058 aa16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 COL4A3Q01955 1670 aa16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 A0A1W2PPE3 182 aa16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 DBX1A6NMT0 343 aa16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 MAN2B1O00754 1011 aa16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 FRS3O43559 492 aa16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 EFEMP2O95967 443 aa16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 SBK2P0C263 348 aa16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 PRKAR2AP13861 404 aaKnown RBP16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 NTSP30990 170 aa16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 ADH7P40394 386 aa16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 EEF1A1P68104 462 aaKnown RBP16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 EEF1A1P5Q5VTE0 462 aa16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 GAREM2Q75VX8 874 aa16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 ZNF461Q8TAF7 563 aa16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 PHYHIPQ92561 330 aa16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 KLK6Q92876 244 aa16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 ALX4Q9H161 411 aaPredicted RBP16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 OR52D1Q9H346 318 aa16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 C8orf33Q9H7E9 229 aaPredicted RBP16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 CMC2Q9NRP2 79 aa16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 HAO2Q9NYQ3 351 aa16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 PLXND1Q9Y4D7 1925 aa16.39■□□□□ 0.21
POLR2J3-209ENST00000504157 RNF222A6NCQ9 220 aa16.38■□□□□ 0.21
POLR2J3-209ENST00000504157 POM121BA6NF01 834 aa16.38■□□□□ 0.21
POLR2J3-209ENST00000504157 OR5H14A6NHG9 310 aa16.38■□□□□ 0.21
POLR2J3-209ENST00000504157 UNC119BA6NIH7 251 aa16.38■□□□□ 0.21
POLR2J3-209ENST00000504157 RHPN2P1A8MT19 583 aa16.38■□□□□ 0.21
POLR2J3-209ENST00000504157 OR2T1O43869 369 aa16.38■□□□□ 0.21
POLR2J3-209ENST00000504157 HMGN2P05204 90 aaKnown RBP16.38■□□□□ 0.21
POLR2J3-209ENST00000504157 PTHLHP12272 177 aa16.38■□□□□ 0.21
POLR2J3-209ENST00000504157 NCBP2P52298 156 aaKnown RBP eCLIP16.38■□□□□ 0.21
POLR2J3-209ENST00000504157 RPS11P62280 158 aaKnown RBP eCLIP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms