RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 SYNGR3O43761 229 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 EFNA2O43921 213 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 TNFRSF6BO95407 300 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 GPANK1O95872 356 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 TK1P04183 234 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 NGFRP08138 427 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 IGFBP1P08833 259 aaPredicted RBP8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 CECR9P0C854 216 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 CTAGE8P0CG41 777 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 CDH2P19022 906 aaPredicted RBP8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 TCN1P20061 433 aaPredicted RBP8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 PIK3CGP48736 1102 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 ALDH3A2P51648 485 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 UBE2NP61088 152 aaKnown RBP8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 GNG11P61952 73 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 CSNK2A1P68400 391 aaPredicted RBP8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 MRPS11P82912 194 aaKnown RBP8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 MVKQ03426 396 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 PDK3Q15120 406 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 MMEL1Q495T6 779 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 HIKESHIQ53FT3 197 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 AVPI1Q5T686 147 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 C3orf33Q6P1S2 294 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 CCBE1Q6UXH8 406 aaPredicted RBP8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 R3HCC1LQ7Z5L2 792 aaKnown RBP8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 WDFY1Q8IWB7 410 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 CTAGE4Q8IX94 777 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 METTL4Q8N3J2 472 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 NOA1Q8NC60 698 aaKnown RBP8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 SLC16A11Q8NCK7 471 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 YIPF5Q969M3 257 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 TM4SF18Q96CE8 201 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 ZHX1-C8orf76Q96EF9 292 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 CFAP36Q96G28 342 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 SNX22Q96L94 193 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 FANCD2OSQ96PS1 177 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 GATA5Q9BWX5 397 aaPredicted RBP8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 MOV10Q9HCE1 1003 aaKnown RBP8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 DDX18Q9NVP1 670 aaKnown RBP8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 PCDHGB4Q9UN71 923 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 PPP2R2CQ9Y2T4 447 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 RNF114Q9Y508 228 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 PCDHGB5Q9Y5G0 923 aa8.21□□□□□ -1.1
SMARCAL1-213ENST00000496037 HYDINQ4G0P3 5121 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 TMEM129A0AVI4 362 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 OR6C65A6NJZ3 312 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 BANF1O75531 89 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 NDUFA7O95182 113 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 IGHV2-5P01817 119 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 MPGP29372 298 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 CALCRP30988 508 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 GABRA3P34903 492 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 MPIP34949 423 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 LGALS4P56470 323 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 KRTAP10-3P60369 221 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 TRA2BP62995 288 aaKnown RBP8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 COL10A1Q03692 680 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 EPS8Q12929 822 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 IFT88Q13099 833 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 TTC19Q6DKK2 380 aaPredicted RBP8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 ANKRD16Q6P6B7 361 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 TRMT10BQ6PF06 316 aaKnown RBP8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 TMEM107Q6UX40 140 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 MMGT1Q8N4V1 131 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 TMCO5AQ8N6Q1 288 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 OR4C3Q8NH37 302 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 PIGXQ8TBF5 258 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 STAG3L4Q8TBR4 150 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 SGCDQ92629 289 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 RAB8BQ92930 207 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 NMD3Q96D46 503 aaKnown RBP8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 FAM120BQ96EK7 910 aaKnown RBP8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 NEIL1Q96FI4 390 aaPredicted RBP8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 TSPAN17Q96FV3 270 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 KLHDC3Q9BQ90 382 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 LMF2Q9BU23 707 aaKnown RBP8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 ADI1Q9BV57 179 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 ALG9Q9H6U8 611 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 AURKAIP1Q9NWT8 199 aaPredicted RBP8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 C1RLQ9NZP8 487 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 ASH2LQ9UBL3 628 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 SLC12A4Q9UP95 1085 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 RNF11Q9Y3C5 154 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 CMAHPQ9Y471 501 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 PSAT1Q9Y617 370 aa8.2□□□□□ -1.1
SMARCAL1-213ENST00000496037 GXYLT2A0PJZ3 443 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 ZNF716A6NP11 495 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 UBXN8O00124 270 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 SULT2B1O00204 365 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 IGKV1D-16P01601 117 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 FGGP02679 453 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 OPN1MWP04001 364 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 OPN1MW2P0DN77 364 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 OPN1MW3P0DN78 364 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 DIO1P49895 249 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 MNAT1P51948 309 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 RPL11P62913 178 aaKnown RBP8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 LCN2P80188 198 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms