RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 APCDD1LQ8NCL9 501 aa14.79□□□□□ -0.04
CBX4-204ENST00000495122 OR6S1Q8NH40 331 aa14.79□□□□□ -0.04
CBX4-204ENST00000495122 CT55Q8WUE5 264 aa14.79□□□□□ -0.04
CBX4-204ENST00000495122 PCSK5Q92824 1860 aa14.79□□□□□ -0.04
CBX4-204ENST00000495122 TMCO6Q96DC7 493 aa14.79□□□□□ -0.04
CBX4-204ENST00000495122 TNFRSF13CQ96RJ3 184 aa14.79□□□□□ -0.04
CBX4-204ENST00000495122 LMF1Q96S06 567 aa14.79□□□□□ -0.04
CBX4-204ENST00000495122 SPSB2Q99619 263 aa14.79□□□□□ -0.04
CBX4-204ENST00000495122 SLIRPQ9GZT3 109 aaKnown RBP14.79□□□□□ -0.04
CBX4-204ENST00000495122 TAS2R16Q9NYV7 291 aa14.79□□□□□ -0.04
CBX4-204ENST00000495122 CHRNA9Q9UGM1 479 aa14.79□□□□□ -0.04
CBX4-204ENST00000495122 CLEC2DQ9UHP7 191 aa14.79□□□□□ -0.04
CBX4-204ENST00000495122 GPN3Q9UHW5 284 aaPredicted RBP14.79□□□□□ -0.04
CBX4-204ENST00000495122 CARD8Q9Y2G2 431 aa14.79□□□□□ -0.04
CBX4-204ENST00000495122 HIF3AQ9Y2N7 669 aa14.79□□□□□ -0.04
CBX4-204ENST00000495122 MEN1O00255 615 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 KLK3P07288 261 aaPredicted RBP14.78□□□□□ -0.04
CBX4-204ENST00000495122 TSPAN19P0C672 248 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 LIMS3P0CW19 117 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 LIMS4P0CW20 117 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 FUT1P19526 365 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 NR4A1P22736 598 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 NOS3P29474 1203 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 EVI2BP34910 448 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 ATP6V1E1P36543 226 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 ENTPD1P49961 510 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 RNF144AP50876 292 aaPredicted RBP14.78□□□□□ -0.04
CBX4-204ENST00000495122 P2RX1P51575 399 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 DLX5P56178 289 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 ZNF117Q03924 483 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 ITGADQ13349 1161 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 DNASE1L3Q13609 305 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 ZNF404Q494X3 552 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 EMC4Q5J8M3 183 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 SLC35D3Q5M8T2 416 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 PAPD4Q6PIY7 484 aaKnown RBP14.78□□□□□ -0.04
CBX4-204ENST00000495122 PHC2Q8IXK0 858 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 PRSS58Q8IYP2 241 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 ACBD7Q8N6N7 88 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 POMGNT2Q8NAT1 580 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 SLC38A9Q8NBW4 561 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 ZNF485Q8NCK3 441 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 OR6Q1Q8NGQ2 317 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 OR51A7Q8NH64 312 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 ZNF563Q8TA94 476 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 RNF138Q8WVD3 245 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 UFD1Q92890 307 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 RPL3LQ92901 407 aaKnown RBP14.78□□□□□ -0.04
CBX4-204ENST00000495122 MRPL48Q96GC5 212 aaKnown RBP14.78□□□□□ -0.04
CBX4-204ENST00000495122 CRB3Q9BUF7 120 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 FKRPQ9H9S5 495 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 ZNF229Q9UJW7 825 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 SSR3Q9UNL2 185 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 NPFFR2Q9Y5X5 522 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 KCNMB2Q9Y691 235 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 DOCK10Q96BY6 2186 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 SHANK1Q9Y566 2161 aa14.78□□□□□ -0.04
CBX4-204ENST00000495122 NBASA2RRP1 2371 aa14.77□□□□□ -0.04
CBX4-204ENST00000495122 IGKV1D-42A0A075B6H8 117 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 TRAV27A0A087WT01 109 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 LOC102723996A0A087X1L8 192 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 METTL15A6NJ78 407 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 C9J4A7 227 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 HCRTR2O43614 444 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 ZFAND5O76080 213 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 MT-ATP6P00846 226 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 IGHEP01854 428 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 GP1BBP13224 206 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 SLC2A5P22732 501 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 GABRA5P31644 462 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 CCR4P51679 360 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 BMXP51813 675 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 MAP2K6P52564 334 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 TAS2R43P59537 309 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 LSM3P62310 102 aaKnown RBP14.77□□□□□ -0.05
CBX4-204ENST00000495122 GGTLC2Q14390 218 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 ZNF74Q16587 644 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 NDUFAF6Q330K2 333 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 PLBD1Q6P4A8 553 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 APOOLQ6UXV4 268 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 GPALPP1Q8IXQ4 340 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 SLC37A3Q8NCC5 494 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 TMEM234Q8WY98 164 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 SH3YL1Q96HL8 342 aaPredicted RBP14.77□□□□□ -0.05
CBX4-204ENST00000495122 CHCHD6Q9BRQ6 235 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 OR51E2Q9H255 320 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 AKIP1Q9NQ31 210 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 NRIP3Q9NQ35 241 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 ERVK13-1Q9NX77 482 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 PADI1Q9ULC6 663 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 PCDHGB7Q9Y5F8 929 aa14.77□□□□□ -0.05
CBX4-204ENST00000495122 A0A075B6Q4 140 aa14.76□□□□□ -0.05
CBX4-204ENST00000495122 LOC100506127A0A0U1RQW1 187 aa14.76□□□□□ -0.05
CBX4-204ENST00000495122 C21orf140B9A014 251 aa14.76□□□□□ -0.05
CBX4-204ENST00000495122 ZNF670-ZNF695F2Z2N8 137 aa14.76□□□□□ -0.05
CBX4-204ENST00000495122 PPP1R3DO95685 299 aa14.76□□□□□ -0.05
CBX4-204ENST00000495122 TXNDC12O95881 172 aa14.76□□□□□ -0.05
CBX4-204ENST00000495122 CXCR1P25024 350 aa14.76□□□□□ -0.05
CBX4-204ENST00000495122 MSX1P28360 303 aa14.76□□□□□ -0.05
CBX4-204ENST00000495122 POLR2HP52434 150 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms